RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SEC13P55735 322 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ARF3P61204 181 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CSTF1Q05048 431 aaKnown RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 SLC35D3Q5M8T2 416 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ARMC6Q6NXE6 501 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ANKRD54Q6NXT1 300 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 TRILQ7L0X0 811 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 C11orf74Q86VG3 221 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 AKAP1Q92667 903 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CCDC3Q9BQI4 270 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 TMEM246Q9BRR3 403 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 SLC19A3Q9BZV2 496 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ACTR6Q9GZN1 396 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 RNF32Q9H0A6 362 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 MKKSQ9NPJ1 570 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 MAT2BQ9NZL9 334 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 NUFIP1Q9UHK0 495 aaKnown RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 GXYLT2A0PJZ3 443 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 GPRIN2O60269 458 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 OR10H2O60403 315 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CTSVO60911 334 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 LYPD3O95274 346 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 IGF2P01344 180 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 POLR2CP19387 275 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 MAKP20794 623 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 NUDT1P36639 197 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 RABIFP47224 123 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 RAG2P55895 527 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 RRAS2P62070 204 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 TNK1Q13470 666 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 RD3Q7Z3Z2 195 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CEACAM19Q7Z692 300 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 PXKQ7Z7A4 578 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 MEX3DQ86XN8 651 aaKnown RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 CSNK1A1LQ8N752 337 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 FAM174AQ8TBP5 190 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ZFAND1Q8TCF1 268 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 C15orf40Q8WUR7 153 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 SMPDL3BQ92485 455 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 THAP7Q9BT49 309 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF426Q9BUY5 554 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 WBP1LQ9NX94 342 aa12.07□□□□□ -0.48
CPSF7-223ENST00000544669 PLXND1Q9Y4D7 1925 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 POM121BA6NF01 834 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 EFCAB7A8K855 629 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 PDCD5O14737 125 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 NDUFB2O95178 105 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 SLC2A10O95528 541 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 CSF2P04141 144 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 ELK1P19419 428 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 HTR2AP28223 471 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 SLC6A1P30531 599 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 GZMKP49863 264 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 SLC16A1P53985 500 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 FAPQ12884 760 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 IL10RAQ13651 578 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 EFR3AQ14156 821 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 GGTLC2Q14390 218 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 DMKNQ6E0U4 476 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-223ENST00000544669 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 OVCH1Q7RTY7 1134 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 OR4N5Q8IXE1 308 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 CA13Q8N1Q1 262 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 OR10G6Q8NH81 332 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 PTP4A1Q93096 173 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 PELOQ9BRX2 385 aaKnown RBP12.06□□□□□ -0.48
CPSF7-223ENST00000544669 C6orf106Q9H6K1 298 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-223ENST00000544669 ENAMQ9NRM1 1142 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 PAQR5Q9NXK6 330 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-223ENST00000544669 ING4Q9UNL4 249 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 NTNG1Q9Y2I2 539 aa12.06□□□□□ -0.48
CPSF7-223ENST00000544669 CKAP5Q14008 2032 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 C2orf92A0A1B0GVN3 265 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 A0A1W2PQF6 199 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 OR6C70A6NIJ9 312 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 FAM183AA6NL82 134 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 NOTOA8MTQ0 251 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 CLDN4O14493 209 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 OGG1O15527 345 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 FGF17O60258 216 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 SRPX2O60687 465 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 SC5DO75845 299 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 TPPPO94811 219 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 UBL3O95164 117 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 FAM157BP0CG42 384 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 MYOGP15173 224 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 RAB3BP20337 219 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 SLC2A5P22732 501 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 TCEA1P23193 301 aaKnown RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 AK4P27144 223 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 GPR18Q14330 331 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 PON3Q15166 354 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF141Q15928 474 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 MAPK14Q16539 360 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms