RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 C19orf47Q8N9M1 422 aaKnown RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 ASCC1Q8N9N2 400 aaKnown RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 CLEC1AQ8NC01 280 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 OR13C2Q8NGS9 318 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 RANBP3Q9H6Z4 567 aaPredicted RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 EGFP01133 1207 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 POU3F1Q03052 451 aaPredicted RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 MLC1Q15049 377 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 PARM1Q6UWI2 310 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 CCDC32Q9BV29 185 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 MMP28Q9H239 520 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 A6NIZ1 184 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 S100A2P29034 98 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 AKR1C2P52895 323 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 RAP1BP61224 184 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 RAP1AP62834 184 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 OR2G6Q5TZ20 316 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 GATA6Q92908 595 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 ZNF583Q96ND8 569 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 MED20Q9H944 212 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 MEPEQ9NQ76 525 aaPredicted RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 ENPP5Q9UJA9 477 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 RHBDD3Q9Y3P4 386 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 TMEM202A6NGA9 273 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 EFCAB7A8K855 629 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 K7ESM1 405 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 TAPBPO15533 448 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 SCRG1O75711 98 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 CSNK1A1P48729 337 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 TBPL2Q6SJ96 375 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 NUDT8Q8WV74 236 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 WBP2Q969T9 261 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 CACNA1SQ13698 1873 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 FAM230AA0A1W2PPH8 454 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 LYRM1O43325 122 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 GASTP01350 101 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 IRF2P14316 349 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 ACTBP60709 375 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 YPEL5P62699 121 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 ACTG1P63261 375 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 PRAMEF20Q5VT98 475 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 MRPL21Q7Z2W9 205 aaKnown RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 LMF2Q9BU23 707 aaKnown RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 ST6GALNAC5Q9BVH7 336 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 TMEM30AQ9NV96 361 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 ZFAND5O76080 213 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 CD40LGP29965 261 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 NUDT1P36639 197 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 TNFRSF17Q02223 184 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 RAB40BQ12829 278 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 ZNF691Q5VV52 312 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 VASNQ6EMK4 673 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 PTCRAQ6ISU1 281 aaPredicted RBP11.96□□□□□ -0.49
CHD4-211ENST00000544484 ZNF322Q6U7Q0 402 aaPredicted RBP11.96□□□□□ -0.49
CHD4-211ENST00000544484 TRAPPC6BQ86SZ2 158 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.49
CHD4-211ENST00000544484 CD34P28906 385 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 WBP2NLQ6ICG8 309 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 OR7E24Q6IFN5 339 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 TMEM207Q6UWW9 146 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 ABHD12BQ7Z5M8 362 aaPredicted RBP11.96□□□□□ -0.49
CHD4-211ENST00000544484 NAT6Q93015 286 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 TCTN2Q96GX1 697 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 ULBP3Q9BZM4 244 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 CXorf36Q9H7Y0 433 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 NOTOA8MTQ0 251 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 WDPCPO95876 746 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 CHRM4P08173 479 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 CHMP24386 653 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 GIPRP48546 466 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 EPHA4P54764 986 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 GGTA1PQ4G0N0 100 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 COX20Q5RI15 118 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 GGHQ92820 318 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 THAP10Q9P2Z0 257 aaPredicted RBP11.96□□□□□ -0.49
CHD4-211ENST00000544484 UBQLN2Q9UHD9 624 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 TMPRSS11EQ9UL52 423 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 AP1M2Q9Y6Q5 423 aa11.96□□□□□ -0.49
CHD4-211ENST00000544484 C7orf72A4D263 438 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 G3V3Y1 287 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 SRPX2O60687 465 aaPredicted RBP11.96□□□□□ -0.5
CHD4-211ENST00000544484 NPR2P20594 1047 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 TUBG1P23258 451 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 VASPP50552 380 aaPredicted RBP11.96□□□□□ -0.5
CHD4-211ENST00000544484 MBTPS1Q14703 1052 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 ZNF704Q6ZNC4 412 aaPredicted RBP11.96□□□□□ -0.5
CHD4-211ENST00000544484 OR8J2Q8NGG1 315 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 PPIL3Q9H2H8 161 aaKnown RBP11.96□□□□□ -0.5
CHD4-211ENST00000544484 ZNF337Q9Y3M9 751 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 MEGF11A6BM72 1044 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 H7C1C5 153 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 SERPINA5P05154 406 aa11.96□□□□□ -0.5
CHD4-211ENST00000544484 FURINP09958 794 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms