RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 RASGEF1BQ0VAM2 473 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 NDUFAF6Q330K2 333 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 KLHL26Q53HC5 615 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 ARL13AQ5H913 290 aaPredicted RBP13.61□□□□□ -0.23
CD4-212ENST00000544344 SLC25A53Q5H9E4 307 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
CD4-212ENST00000544344 FAM166AQ6J272 317 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
CD4-212ENST00000544344 PHOSPHO1Q8TCT1 267 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 TNFRSF12AQ9NP84 129 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 KCNS2Q9ULS6 477 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 CARD8Q9Y2G2 431 aa13.61□□□□□ -0.23
CD4-212ENST00000544344 NPIPA5A0A0B4J1W7 369 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 NPIPA7E9PJI5 369 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 POC1B-GALNT4F8VUJ3 575 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 ETV2O00321 342 aaPredicted RBP13.6□□□□□ -0.23
CD4-212ENST00000544344 RAD51DO75771 328 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 RSL1D1O76021 490 aaKnown RBP13.6□□□□□ -0.23
CD4-212ENST00000544344 H6PDO95479 791 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 ALOX5P09917 674 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 CSF3P09919 207 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 DHRS4L1P0CG22 281 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 NPIPA8P0DM63 369 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 PTAFRP25105 342 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 SERPINB4P48594 390 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 SUMO3P55854 103 aaPredicted RBP13.6□□□□□ -0.23
CD4-212ENST00000544344 RUNX1T1Q06455 604 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 ZNF544Q6NX49 715 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 COX18Q8N8Q8 333 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 OR52N5Q8NH56 324 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 MRGPRX4Q96LA9 322 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 BTBD2Q9BX70 525 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 ANKZF1Q9H8Y5 726 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 EML4Q9HC35 981 aaKnown RBP13.6□□□□□ -0.23
CD4-212ENST00000544344 MID1IP1Q9NPA3 183 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 POU2F3Q9UKI9 436 aa13.6□□□□□ -0.23
CD4-212ENST00000544344 MEGF8Q7Z7M0 2845 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 LOC100289279A0A1B0GTE1 492 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 A0A1W2PR80 420 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 ESPNB1AK53 854 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 TBX19O60806 448 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 NUDT14O95848 222 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 PGRP06401 933 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 NTF4P34130 210 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 FOXG1P55316 489 aaPredicted RBP13.59□□□□□ -0.23
CD4-212ENST00000544344 POU6F2P78424 691 aaPredicted RBP13.59□□□□□ -0.23
CD4-212ENST00000544344 SELENBP1Q13228 472 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 IMPG1Q17R60 797 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 ZCCHC12Q6PEW1 402 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 LRIG3Q6UXM1 1119 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 ZNF572Q7Z3I7 529 aaPredicted RBP13.59□□□□□ -0.23
CD4-212ENST00000544344 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 GALNT5Q7Z7M9 940 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 SLC22A9Q8IVM8 553 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 CDS1Q92903 461 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 C1orf159Q96HA4 380 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 INPP5KQ9BT40 448 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 SIRT3Q9NTG7 399 aaPredicted RBP13.59□□□□□ -0.23
CD4-212ENST00000544344 GIN1Q9NXP7 522 aa13.59□□□□□ -0.23
CD4-212ENST00000544344 IGKV3D-15A0A087WSY6 115 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 IGHV4-61A0A0C4DH41 118 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 NPIPB9F8W1W9 429 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 HSPA4LO95757 839 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 SNRPAP09012 282 aaKnown RBP13.58□□□□□ -0.24
CD4-212ENST00000544344 PRPH2P23942 346 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 GCAP28676 217 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 SLC7A1P30825 629 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 NR4A2P43354 598 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 CHRNEQ04844 493 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 PDE7AQ13946 482 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 GGTLC2Q14390 218 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 MST1LQ2TV78 715 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 TIFABQ6ZNK6 161 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 ZNF100Q8IYN0 542 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 FAM120BQ96EK7 910 aaKnown RBP13.58□□□□□ -0.24
CD4-212ENST00000544344 FCRL1Q96LA6 429 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 MUS81Q96NY9 551 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 STACQ99469 402 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 SOX7Q9BT81 388 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 REEP4Q9H6H4 257 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 DUSP22Q9NRW4 184 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 ACSS1Q9NUB1 689 aaPredicted RBP13.58□□□□□ -0.24
CD4-212ENST00000544344 PYCARDQ9ULZ3 195 aa13.58□□□□□ -0.24
CD4-212ENST00000544344 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 M0R1B8 84 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 AKAP10O43572 662 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 HMGN2P05204 90 aaKnown RBP13.57□□□□□ -0.24
CD4-212ENST00000544344 EFNA1P20827 205 aaPredicted RBP13.57□□□□□ -0.24
CD4-212ENST00000544344 QPRTQ15274 297 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 GABRA6Q16445 453 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 SWI5Q1ZZU3 235 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 LIPNQ5VXI9 398 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 ABLIM2Q6H8Q1 611 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 WDR31Q8NA23 367 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 JADE3Q92613 823 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms