RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ACADVLP49748 655 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 STK19P49842 368 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 ELAVL2Q12926 359 aaKnown RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 CYLC2Q14093 348 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 MAJINQ3KP22 176 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 RABGAP1LQ5R372 815 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 SLX4IPQ5VYV7 408 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 LEMD1Q68G75 181 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF343Q6P1L6 599 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 BLOC1S2Q6QNY1 142 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 TIPARPQ7Z3E1 657 aaKnown RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 SPEM1Q8N4L4 309 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 C4orf32Q8N8J7 132 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 DENND6BQ8NEG7 585 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 TRPV1Q8NER1 839 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 OR2T3Q8NH03 318 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 PNPT1Q8TCS8 783 aaKnown RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 RAET1EQ8TD07 263 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 TBCKQ8TEA7 893 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 TADA1Q96BN2 335 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 VGLL1Q99990 258 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 ADNPQ9H2P0 1102 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 JPT2Q9H910 190 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 EXOSC1Q9Y3B2 195 aaKnown RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 ATG2AQ2TAZ0 1938 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 ZBED9Q6R2W3 1325 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 CNTNAP2Q9UHC6 1331 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 IGHV3OR16-10A0A075B7F0 116 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 BCLAF3A2AJT9 711 aaKnown RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 FAM74A7A6NL05 159 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 GPR89AB7ZAQ6 455 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 RIPK2O43353 540 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 PPIHO43447 177 aaKnown RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 PRKAB2O43741 272 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 OR1F1O43749 312 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 DUX1O43812 170 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 TYROBPO43914 113 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 EFNA2O43921 213 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 TBX19O60806 448 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 MTX2O75431 263 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 MFN2O95140 757 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 UQCRFS1P1P0C7P4 283 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 GPR89BP0CG08 455 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 CYP2B6P20813 491 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 RGS4P49798 205 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 RPS6P62753 249 aaKnown RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 SELPLGQ14242 412 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 FAM74A3Q4VXF1 159 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 C14orf28Q4W4Y0 310 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 MS4A13Q5J8X5 152 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 OTUD3Q5T2D3 398 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 LINC00242Q5T6M2 205 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 GFI1BQ5VTD9 330 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ARMCX5Q6P1M9 558 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 STOX1Q6ZVD7 989 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ITPRIPQ8IWB1 547 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ABHD12Q8N2K0 398 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 OR5AU1Q8NGC0 362 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 OR52M1Q8NGK5 317 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 NANPQ8TBE9 248 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 SDR42E1Q8WUS8 393 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 C11orf24Q96F05 449 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 C12orf42Q96LP6 360 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF599Q96NL3 588 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 GORASP2Q9H8Y8 452 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 MEPEQ9NQ76 525 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 STYXL1Q9Y6J8 313 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 REV3LO60673 3130 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 PRUNE2Q8WUY3 3088 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF532Q9HCE3 1301 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 MYO9BQ13459 2157 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 A0A1B0GTH9 108 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 FOXI3A8MTJ6 420 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 A8MUI8 341 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 SHISA9B4DS77 424 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 C11orf98E9PRG8 122 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 K7EQM0 130 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 DCXO43602 365 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 VENTXO95231 258 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ANP32DO95626 131 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 NUDT14O95848 222 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 UGT2B4P06133 528 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 UQCRC2P22695 453 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 GBX2P52951 348 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 PAX8Q06710 450 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ABRAXAS2Q15018 415 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 C17orf58Q2M2W7 97 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 REP15Q6BDI9 236 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 PYHIN1Q6K0P9 492 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 LANCL3Q6ZV70 420 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 KIAA1328Q86T90 577 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 VASH2Q86V25 355 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 KRTAP7-1Q8IUC3 87 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 Q8N377 158 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 RFESDQ8TAC1 157 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 FBXO30Q8TB52 745 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 M1APQ8TC57 530 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 CRYGNQ8WXF5 182 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms