RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 C1GALT1Q9NS00 363 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 EMCNQ9ULC0 261 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 KCNMB2Q9Y691 235 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
VPS13D-212ENST00000543766 ATP6AP2A0A1C7CYW4 349 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FAM227AF5H4B4 570 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 GFYI3L273 518 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CLIC1O00299 241 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 SEPT4O43236 478 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 PDE6DO43924 150 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TBX19O60806 448 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TULP3O75386 442 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 BRI3O95415 125 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MT-CO2P00403 227 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 C1QBP02746 253 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MYOGP15173 224 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TPSB2P20231 275 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 INPP1P49441 399 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 HLCSP50747 726 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 LAPTM4AQ15012 233 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TPSAB1Q15661 275 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FAM69BQ5VUD6 431 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 RGS7BPQ6MZT1 257 aaPredicted RBP8.3□□□□□ -1.08
VPS13D-212ENST00000543766 PRSS57Q6UWY2 283 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FBXO36Q8NEA4 188 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 OR2AP1Q8NGE2 309 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FAM110BQ8TC76 370 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 PIH1D2Q8WWB5 315 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FCGR1BQ92637 280 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 BPIFA2Q96DR5 249 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM176AQ96HP8 235 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FIZ1Q96SL8 496 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CNN2Q99439 309 aaKnown RBP8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TEAD3Q99594 435 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CBWD1Q9BRT8 395 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 NDUFAF3Q9BU61 184 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 ADAT1Q9BUB4 502 aaKnown RBP8.3□□□□□ -1.08
VPS13D-212ENST00000543766 ENKD1Q9H0I2 346 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TRIM36Q9NQ86 728 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CBLN4Q9NTU7 201 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TGIF2-C20orf24A0A0A6YYL0 155 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TCRBV9S1A1TA0A576 114 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MEIS3P2A8K0S8 358 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 SOCS2O14508 198 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 GLRA3O75311 464 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 YIF1AO95070 293 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CLIC3O95833 236 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 ETFAP13804 333 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 SDHAP31040 664 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CSNK1A1P48729 337 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 CKS1BP61024 79 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 HIST2H2ACQ16777 129 aaPredicted RBP8.3□□□□□ -1.08
VPS13D-212ENST00000543766 C1orf220Q5T0J3 134 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 EPGNQ6UW88 154 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MOB2Q70IA6 237 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 KANSL1Q7Z3B3 1105 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 SERPINA9Q86WD7 417 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 ANGPTL5Q86XS5 388 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 ABRAQ8N0Z2 381 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 GHDCQ8N2G8 530 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MYLIPQ8WY64 445 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 COA7Q96BR5 231 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 REEP6Q96HR9 211 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 RNF170Q96K19 258 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 STACQ99469 402 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 TWSG1Q9GZX9 223 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MEAF6Q9HAF1 191 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 GALNT9Q9HCQ5 603 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 MRM2Q9UI43 246 aaKnown RBP8.3□□□□□ -1.08
VPS13D-212ENST00000543766 PKP3Q9Y446 797 aa8.3□□□□□ -1.08
VPS13D-212ENST00000543766 AGPAT2O15120 278 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ZMPSTE24O75844 475 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TSPAN12O95859 305 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 IGHA2P01877 340 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TNFSF10P50591 281 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 UCP2P55851 309 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 SLC35B2Q8TB61 432 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ZBED6CLQ96FA7 236 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 SLC22A12Q96S37 553 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM47Q9BQJ4 181 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 REEP2Q9BRK0 252 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 SCNM1Q9BWG6 230 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TBL1XR1Q9BZK7 514 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 MSRAQ9UJ68 235 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ANGPT4Q9Y264 503 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM189-UBE2V1I3L0A0 370 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 K7ERU9 68 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PLRG1O43660 514 aaKnown RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 CILPO75339 1184 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 RAD17O75943 681 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TOXO94900 526 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PROSCO94903 275 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 IGSF6O95976 241 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 METTL15P1P0C7V9 234 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 UNGP13051 313 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms