RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 HSD17B8Q92506 261 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 PHYHIPQ92561 330 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 KAT2AQ92830 837 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 LRRC3BQ96PB8 259 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 SORCS2Q96PQ0 1159 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 XKR8Q9H6D3 395 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 ADGRL4Q9HBW9 690 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 IL20RAQ9UHF4 553 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF222Q9UK12 451 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 CAMK2AQ9UQM7 478 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 GPSM3Q9Y4H4 160 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 HEBP2Q9Y5Z4 205 aa12.73□□□□□ -0.37
VPS33A-208ENST00000543633 BTN3A3O00478 584 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 PRAF2O60831 178 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 GATBO75879 557 aaKnown RBP12.72□□□□□ -0.37
VPS33A-208ENST00000543633 IFNA7P01567 189 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 IFI30P13284 250 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 NID1P14543 1247 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF3P17036 446 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 MAKP20794 623 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 RPS15AP62244 130 aaKnown RBP12.72□□□□□ -0.37
VPS33A-208ENST00000543633 KRT33BQ14525 404 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 LTB4RQ15722 352 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 B3GLCTQ6Y288 498 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 FBXL6Q8N531 539 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 OR56B4Q8NH76 319 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SDF2Q99470 211 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 CACNG6Q9BXT2 260 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 TMEM168Q9H0V1 697 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 KIR3DX1Q9H7L2 352 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 HEXA-AS1Q9H8Q6 139 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 GLTPQ9NZD2 209 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 AKAP7Q9P0M2 348 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-208ENST00000543633 KCNN3Q9UGI6 736 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SCP2D1Q9UJQ7 156 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SIGLEC7Q9Y286 467 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 COL4A2P08572 1712 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 NUMA1Q14980 2115 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 OGG1O15527 345 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 H2AFB2P0C5Z0 115 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 PEBP1P30086 187 aaKnown RBP12.72□□□□□ -0.37
VPS33A-208ENST00000543633 BMP8BP34820 402 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 OR10A3P58181 314 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF85Q03923 595 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 GSG1Q2KHT4 349 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ACSM3Q53FZ2 586 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 CLLU1Q5K131 121 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ZCCHC12Q6PEW1 402 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 OVCH1Q7RTY7 1134 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 BMP8AQ7Z5Y6 402 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SPRED2Q7Z698 418 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 GRASPQ7Z6J2 395 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ING5Q8WYH8 240 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 C4orf36Q96KX1 117 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ART5Q96L15 291 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 MED20Q9H944 212 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 PLEKHA1Q9HB21 404 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 PRSS16Q9NQE7 514 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 DUSP22Q9NRW4 184 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 ST6GALNAC2Q9UJ37 374 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 SPATA2Q9UM82 520 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
VPS33A-208ENST00000543633 TRAV6A0A075B6T7 132 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 CDHR4A6H8M9 788 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 FLRT2O43155 660 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 IFNGP01579 166 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 HTR2AP28223 471 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 NDUFS1P28331 727 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 DRD3P35462 400 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 RAB8AP61006 207 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 ACTA2P62736 377 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 ACTG2P63267 376 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 E2F1Q01094 437 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 SLC3A1Q07837 685 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 KLF9Q13886 244 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-208ENST00000543633 IRF4Q15306 451 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 RPE65Q16518 533 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 DUSP5Q16690 384 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 AMZ1Q400G9 498 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 GPR139Q6DWJ6 353 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 ARHGAP11AQ6P4F7 1023 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 PAQR7Q86WK9 346 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 SIAH3Q8IW03 269 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 EID2Q8N6I1 236 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.37
VPS33A-208ENST00000543633 OR4K14Q8NGD5 310 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 PTP4A1Q93096 173 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 NACC2Q96BF6 587 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 STACQ99469 402 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 TBX5Q99593 518 aa12.71□□□□□ -0.37
VPS33A-208ENST00000543633 IFT27Q9BW83 186 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms