RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 EBAG9O00559 213 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 CCL21O00585 134 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 AP3D1O14617 1153 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 FRS3O43559 492 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 TPST1O60507 370 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SLC19A2O60779 497 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ATP5HO75947 161 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 WISP2O76076 250 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 MFN2O95140 757 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SERPINA1P01009 418 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 OPN1LWP04000 364 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 TFPIP10646 304 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PEPDP12955 493 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PLA2G2AP14555 144 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 NCK1P16333 377 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ZNF17P17021 662 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 BMP7P18075 431 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 CHMP24386 653 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 CXCR1P25024 350 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SLC7A1P30825 629 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 KDELR2P33947 212 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SFTPDP35247 375 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 UQCRFS1P47985 274 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 STARP49675 285 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 GZMMP51124 257 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 RPS3AP61247 264 aaKnown RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 EEF1A1P68104 462 aaKnown RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 HOXC5Q00444 222 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 DMTNQ08495 405 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 EPS8Q12929 822 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SF3B4Q15427 424 aaKnown RBP eCLIP5.72□□□□□ -1.492e-10■■■■■ 32.9
LTBR-212ENST00000543542 TOMM34Q15785 309 aaPredicted RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 C3AR1Q16581 482 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SGCBQ16585 318 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.72□□□□□ -1.49
LTBR-212ENST00000543542 PLPPR5Q32ZL2 321 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 GXYLT1Q4G148 440 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 CYBRD1Q53TN4 286 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PDSS1Q5T2R2 415 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 RNF220Q5VTB9 566 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 C1QL3Q5VWW1 255 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 GLYATQ6IB77 296 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 C8orf82Q6P1X6 216 aaPredicted RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 DHRS4L2Q6PKH6 230 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 CCDC121Q6ZUS5 278 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 FKBP9P1Q75LS8 142 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 P4HA3Q7Z4N8 544 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 FJX1Q86VR8 437 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 GRAMD2AQ8IUY3 354 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PM20D2Q8IYS1 436 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 MEIOBQ8N635 442 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 FAM156AQ8NDB6 213 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 OR52E4Q8NGH9 312 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 FAM57AQ8TBR7 257 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ST8SIA1Q92185 356 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 RELTQ969Z4 430 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 NTNG2Q96CW9 530 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 LRGUKQ96M69 825 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 BARD1Q99728 777 aaKnown RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 THTPAQ9BU02 230 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 UGT2B28Q9BY64 529 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PRRG4Q9BZD6 226 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 TP63Q9H3D4 680 aaPredicted RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 TMEM185BQ9H7F4 350 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 EVA1AQ9H8M9 152 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 TMEM27Q9HBJ8 222 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PNPLA3Q9NST1 481 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 DNAJB12Q9NXW2 375 aaKnown RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 GMPR2Q9P2T1 348 aaKnown RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 SPRR3Q9UBC9 169 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ABCD2Q9UBJ2 740 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 MAGEL2Q9UJ55 1249 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 RPS6KA6Q9UK32 745 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ICAM5Q9UMF0 924 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 PRPF19Q9UMS4 504 aaKnown RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 SLC9A8Q9Y2E8 581 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SH3GLB1Q9Y371 365 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 ZNF337Q9Y3M9 751 aa5.72□□□□□ -1.49
LTBR-212ENST00000543542 SPIN1Q9Y657 262 aaPredicted RBP5.72□□□□□ -1.49
LTBR-212ENST00000543542 FREM3P0C091 2139 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TMED7-TICAM2A0A0A6YYA0 188 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 A0A1B0GUH1 482 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ELOA3DA6NLF2 546 aaPredicted RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 CPSF4LA6NMK7 179 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 B4DXG7 233 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 EIF1AYO14602 144 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 ADAM10O14672 748 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ZIC3O60481 467 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 WDR1O75083 606 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 BCAS1O75363 584 aaPredicted RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 PDE5AO76074 875 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 FESP07332 822 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 C8BP07358 591 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 T-ENOLP0DO92 83 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PRG2P13727 222 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 HSD17B1P14061 328 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 GABRA1P14867 456 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PRKCAP17252 672 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 GGT1P19440 569 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms