RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ARHGAP40Q5TG30 622 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 RPL13AP3Q6NVV1 102 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 NUP54Q7Z3B4 507 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 MS4A15Q8N5U1 240 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 JSRP1Q96MG2 331 aaPredicted RBP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CDCA4Q9BXL8 241 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 SLAMF7Q9NQ25 335 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 MUTYHQ9UIF7 546 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 ATRXP46100 2492 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CDC40O60508 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 NDUFB2O95178 105 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 PRKCAP17252 672 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CLDN12P56749 244 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 PSMA6P60900 246 aaKnown RBP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 MAT1AQ00266 395 aaKnown RBP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 PDE7AQ13946 482 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 GRK1Q15835 563 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CDKN3Q16667 212 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 C3orf38Q5JPI3 329 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 MEPCEQ7L2J0 689 aaKnown RBP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CCDC28AQ8IWP9 274 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 PCNPQ8WW12 178 aaKnown RBP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 TANKQ92844 425 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CHST8Q9H2A9 424 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 HHATLQ9HCP6 504 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 TBC1D29Q9UFV1 150 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 MGAT4AQ9UM21 535 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CPED1A4D0V7 1026 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 LGI1O95970 557 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SNRPBP14678 240 aaKnown RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 GIFP27352 417 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 TEAD1P28347 426 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SNRPGP62308 76 aaKnown RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 DBPQ10586 325 aaPredicted RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 CHAF1BQ13112 559 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ACOT12Q8WYK0 555 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 CNRIP1Q96F85 164 aaPredicted RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ZNF559Q9BR84 538 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 NKX2-4Q9H2Z4 354 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 UBQLN3Q9H347 655 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SYNPO2LQ9H987 977 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 PCM1Q15154 2024 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 KANTRA0A1W2PQU2 76 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 CDC14CA4D256 554 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 HMX3A6NHT5 357 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 HYAL3O43820 417 aaPredicted RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SEMA4FO95754 770 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 HOXB3P14651 431 aaPredicted RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 S100GP29377 79 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 GDI2P50395 445 aaKnown RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 DUSP5Q16690 384 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 C1orf189Q5VU69 101 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 COQ8AQ8NI60 647 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ZG16BQ96DA0 208 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 RXFP3Q9NSD7 469 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 M0R233 179 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 PEX12O00623 359 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 LCN1P31025 176 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 GPR143P51810 404 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 FXYD6P3P58550 94 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 BAK1Q16611 211 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ZCCHC12Q6PEW1 402 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ZNF547Q8IVP9 402 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ZNF101Q8IZC7 436 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 NAXEQ8NCW5 288 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 OR2T35Q8NGX2 323 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 PFN4Q8NHR9 129 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 FCAMRQ8WWV6 532 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SNAPC3Q92966 411 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 G6PC3Q9BUM1 346 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 CKAP5Q14008 2032 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SLC9B1P1A6NJY1 282 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 PRKNO60260 465 aaPredicted RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 RACK1P63244 317 aaKnown RBP13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SQSTM1Q13501 440 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 TMEM52BQ4KMG9 183 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SFXN5Q8TD22 340 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 PLA2G12AQ9BZM1 189 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 PPIL1Q9Y3C6 166 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 ALG5Q9Y673 324 aa13.5□□□□□ -0.25
GCFC2-211ENST00000541687 SPAG17Q6Q759 2223 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 FAM186AA6NE01 2351 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 LRRTM2O43300 516 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 GPR75O95800 540 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 F3P13726 295 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 GRK5P34947 590 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 PSPHP78330 225 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 SHISA6Q6ZSJ9 500 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 MFSD4AQ8N468 514 aa13.49□□□□□ -0.25
GCFC2-211ENST00000541687 GPR32P1Q8NGA4 272 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms