RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC30A6Q6NXT4 461 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 RRM2BQ7LG56 351 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 CLVS1Q8IUQ0 354 aaPredicted RBP11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 CMIPQ8IY22 773 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 OR13C2Q8NGS9 318 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 C3orf49Q96BT1 292 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 SAMD8Q96LT4 415 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 PRRX2Q99811 253 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 ARMC7Q9H6L4 198 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 ENOPH1Q9UHY7 261 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 PPIEQ9UNP9 301 aaKnown RBP11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 GPR52Q9Y2T5 361 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 PCSK5Q92824 1860 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 OR6C76A6NM76 312 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 C4orf47A7E2U8 309 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 B4E171 279 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 WWP2O00308 870 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SCDO00767 359 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 RGS10O43665 173 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SEC14L2O76054 403 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC2A10O95528 541 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CH25HO95992 272 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 LCKP06239 509 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 UBL4AP11441 157 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 PAX7P23759 505 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 IL12BP29460 328 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 IFNGR2P38484 337 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TSPAN7P41732 249 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC26A5P58743 744 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF117Q03924 483 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 PCOLCEQ15113 449 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TOMM34Q15785 309 aaPredicted RBP11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 GPR107Q5VW38 600 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF517Q6ZMY9 492 aaPredicted RBP11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CCDC81Q6ZN84 652 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TIPARPQ7Z3E1 657 aaKnown RBP11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 MRGPREQ86SM8 312 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 BPHLQ86WA6 291 aaPredicted RBP11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 OR5M3Q8NGP4 307 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 METTL21AQ8WXB1 218 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 COPS4Q9BT78 406 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TSSK6Q9BXA6 273 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TRIM2Q9C040 744 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SCN3BQ9NY72 215 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 NDUFA13Q9P0J0 144 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 UNC119BA6NIH7 251 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TLX2O43763 284 aaPredicted RBP11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 ADH7P40394 386 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC15A1P46059 708 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 PCYT1AP49585 367 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CCR4P51679 360 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 FBXW4P57775 412 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TEKQ02763 1124 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TMEM201Q5SNT2 666 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CDCP2Q5VXM1 449 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 HSDL2Q6YN16 418 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TOR1AIP2Q8NFQ8 470 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TEX47Q8TBZ9 253 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 ISOC1Q96CN7 298 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 HOXD1Q9GZZ0 328 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 ZBTB20Q9HC78 741 aaPredicted RBP11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 TBC1D23Q9NUY8 699 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 IL20Q9NYY1 176 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC35A3Q9Y2D2 325 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 SNX5Q9Y5X3 404 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
AP003559.1-201ENST00000540906 CPAMD8Q8IZJ3 1885 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 TRAV27A0A087WT01 109 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 ENO4A6NNW6 628 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF264O43296 627 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 SCO2O43819 266 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 FADS1O60427 444 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 CDK1P06493 297 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 ACVR2AP27037 513 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 GSTT1P30711 240 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 CTBP2P56545 445 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 RPS18P62269 152 aaKnown RBP11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 NCF4Q15080 339 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 ISXQ2M1V0 245 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 PGGHGQ32M88 737 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC27A4Q6P1M0 643 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 CASP12Q6UXS9 341 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 RNF113BQ8IZP6 322 aaKnown RBP11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 TMCO5AQ8N6Q1 288 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 LRRC17Q8N6Y2 441 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 WDR36Q8NI36 951 aaKnown RBP11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC35B4Q969S0 331 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 BPIFA2Q96DR5 249 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 HSPBAP1Q96EW2 488 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 LRFN5Q96NI6 719 aa11.22□□□□□ -0.61
AP003559.1-201ENST00000540906 POLDIP3Q9BY77 421 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms