RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SOD1P00441 154 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 THEGLP0DJG4 465 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 MPC1LP0DKB6 136 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 DNASE1P24855 282 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 HOXC12P31275 282 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 KCNJ3P48549 501 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 AP1S2P56377 157 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PFN3P60673 137 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PRR5P85299 388 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 DOC2AQ14183 400 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SEC23BQ15437 767 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PLA1AQ53H76 456 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SYT14P1Q58G82 188 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 FAM180BQ6P0A1 224 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 C1orf94Q6P1W5 598 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PGBD2Q6P3X8 592 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TSPAN33Q86UF1 283 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PAQR7Q86WK9 346 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLC39A11Q8N1S5 342 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 MS4A15Q8N5U1 240 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 MRPL43Q8N983 215 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 MOSPD2Q8NHP6 518 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLC22A18Q96BI1 424 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 NXPE2Q96DL1 559 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SCMH1Q96GD3 660 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TRMT2BQ96GJ1 504 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 HSPA12BQ96MM6 686 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLC38A2Q96QD8 506 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 OR2M2Q96R28 347 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLC46A2Q9BY10 475 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PITHD1Q9GZP4 211 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 OR51J1Q9H342 316 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 DPAGT1Q9H3H5 408 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 REEP4Q9H6H4 257 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SEC61A2Q9H9S3 476 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 BRF2Q9HAW0 419 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ENAMQ9NRM1 1142 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CENPMQ9NSP4 180 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TESQ9UGI8 421 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 EDARQ9UNE0 448 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SESN1Q9Y6P5 492 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 KIAA1549LQ6ZVL6 1849 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 A0A1B0GVI7 797 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 A0A1W2PRB8 838 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 OR6C74A6NCV1 312 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PRSS44E7EML9 344 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 E7EQ34 232 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 F8W036 122 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PSMD9O00233 223 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 RTCAO00442 366 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 GABRPO00591 440 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SMAD6O43541 496 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 LANCL1O43813 399 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SSX5O60225 188 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ETHE1O95571 254 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 RECKO95980 971 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ACP2P11117 423 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CXCL12P48061 93 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CCR8P51685 355 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 GBX2P52951 348 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 RAB40BQ12829 278 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 RAB33AQ14088 237 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CST6Q15828 149 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 NTRK2Q16620 822 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 DUSP6Q16828 381 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 GRHL2Q6ISB3 625 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLC30A6Q6NXT4 461 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 UNC5DQ6UXZ4 953 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 THOC6Q86W42 341 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 OR4N5Q8IXE1 308 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 OR6K6Q8NGW6 343 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TEX47Q8TBZ9 253 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 WFDC5Q8TCV5 224 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 GRHL3Q8TE85 626 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ASB11Q8WXH4 323 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ACOT12Q8WYK0 555 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 HLA-CQ95604 372 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CHFRQ96EP1 664 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SENP5Q96HI0 755 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 TMED9Q9BVK6 235 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PRR14Q9BWN1 585 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TMEM121BQ9BXQ6 578 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 SPRTNQ9H040 489 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 TMEM168Q9H0V1 697 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLITRK2Q9H156 845 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 TBC1D17Q9HA65 648 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 PCDHB16Q9NRJ7 776 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 NUDT15Q9NV35 164 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 SLCO1C1Q9NYB5 712 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 KLRF1Q9NZS2 232 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 ATXN7L1Q9ULK2 861 aaPredicted RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 SPATA2Q9UM82 520 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 EXO1Q9UQ84 846 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 CA5BQ9Y2D0 317 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 NOSIPQ9Y314 301 aaKnown RBP4.89□□□□□ -1.63
PROM1-220ENST00000540805 NUBP2Q9Y5Y2 271 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 CFAP54Q96N23 3096 aa4.89□□□□□ -1.63
PROM1-220ENST00000540805 FAM208BQ5VWN6 2430 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SNRNP200O75643 2136 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms