RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 WWP2O00308 870 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 ATXN7O15265 892 aaPredicted RBP13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF264O43296 627 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 ADAM11O75078 769 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 GNAO1P09471 354 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 UBL4AP11441 157 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 DLSTP36957 453 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 IFNGR2P38484 337 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 UGT2B15P54855 530 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 FOXD4Q12950 439 aaPredicted RBP13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 KEAP1Q14145 624 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 CD226Q15762 336 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 C1orf94Q6P1W5 598 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 IGF2-ASQ6U949 168 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 PCSK4Q6UW60 755 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 APOOLQ6UXV4 268 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 PHOSPHO1Q8TCT1 267 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 LAT2Q9GZY6 243 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
CYB561A3-216ENST00000540755 CDRT15L2A8MXV6 281 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 BCKDKO14874 412 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 CHP2O43745 196 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 FADS1O60427 444 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF354AO60765 605 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 SMNDC1O75940 238 aaKnown RBP eCLIP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 LYPD3O95274 346 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 CLIC3O95833 236 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 HPP00738 406 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ICAM2P13598 275 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 RBMS1P29558 406 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 OTX2P32243 289 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 EVI2BP34910 448 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 POLR2IP36954 125 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 CLK3P49761 638 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 SKP2Q13309 424 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 DESI1Q6ICB0 168 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 C16orf47Q6ZP98 133 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 NUP54Q7Z3B4 507 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZER1Q7Z7L7 766 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 NKAIN4Q8IVV8 208 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF248Q8NDW4 579 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 THAP3Q8WTV1 239 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 TTC9Q92623 222 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 HGDQ93099 445 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 GTPBP3Q969Y2 492 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 TMCO6Q96DC7 493 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 MUS81Q96NY9 551 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 PITX2Q99697 317 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 PRSS27Q9BQR3 290 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 TBL1XR1Q9BZK7 514 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZBTB20Q9HC78 741 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 MYRFQ9Y2G1 1151 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 PCDHGB5Q9Y5G0 923 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 A0A1B0GWA3 101 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 GTPBP1O00178 669 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 EIF4E2O60573 245 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 POU2F1P14859 743 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 F8A1P23610 371 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC6A8P48029 635 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ESRRGP62508 458 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 COX10Q12887 443 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 NDUFAF6Q330K2 333 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF691Q5VV52 312 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 MBOAT2Q6ZWT7 520 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 RRM2BQ7LG56 351 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 MISPQ8IVT2 679 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 RNF113BQ8IZP6 322 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 C8orf59Q8N0T1 100 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ARMC10Q8N2F6 343 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 GATSQ8NAP1 163 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 RNF138Q8WVD3 245 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 MPP4Q96JB8 637 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 MRPS26Q9BYN8 205 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 UCK2Q9BZX2 261 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ZNF160Q9HCG1 818 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 KRCC1Q9NPI7 259 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 TUBA8Q9NY65 449 aaPredicted RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 NDRG4Q9ULP0 352 aaKnown RBP13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 HSPE1-MOB4S4R3N1 261 aa13.04□□□□□ -0.32
CYB561A3-216ENST00000540755 ASH1LQ9NR48 2969 aaKnown RBP13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 COL6A6A6NMZ7 2263 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 PIEZO2Q9H5I5 2752 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 TENM4Q6N022 2769 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 LOC101059948A0A1B0GTJ6 334 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 NDUFB5O43674 189 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 OR2J2O76002 312 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 CELA2AP08217 269 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 FBXO45P0C2W1 286 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 OSMP13725 252 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 GSTM3P21266 225 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 RYKP34925 604 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 OMPP47874 163 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 TPD52P55327 224 aaPredicted RBP13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 FBXW4P57775 412 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms