RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 FAM26EQ8N5C1 309 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 AKR1E2Q96JD6 320 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 ST6GALNAC5Q9BVH7 336 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 IL26Q9NPH9 171 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 TDP1Q9NUW8 608 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 SPATA6Q9NWH7 488 aaPredicted RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 PCDHGA9Q9Y5G4 932 aaKnown RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 MYO5CQ9NQX4 1742 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 A0A1W2PPV4 95 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 MSTNO14793 375 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 PLSCR1O15162 318 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 H2BFMP0C1H6 154 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 PGGT1BP53609 377 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 ITPRIPL2Q3MIP1 535 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 FRMPD2BQ6IN97 320 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 Q6ZRG5 221 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 AMIGO3Q86WK7 504 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 SLC35F2Q8IXU6 374 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 TOP6BLQ8N6T0 577 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 OR52E2Q8NGJ4 325 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 OR10G6Q8NH81 332 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 ZCCHC10Q8TBK6 192 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 METTL21AQ8WXB1 218 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 RBM18Q96H35 190 aaKnown RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 PITX2Q99697 317 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 NIFKQ9BYG3 293 aaKnown RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 XYLT2Q9H1B5 865 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 RHOFQ9HBH0 211 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 TTC24A2A3L6 582 aaPredicted RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 MTMR11A4FU01 709 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 DVL2O14641 736 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 RAD1O60671 282 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 TBX19O60806 448 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 METTL15P1P0C7V9 234 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 SHMT1P34896 483 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 PIGAP37287 484 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 RIDAP52758 137 aaKnown RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 STC1P52823 247 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 CRHR2Q13324 411 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 FBXO16Q8IX29 292 aaPredicted RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 PQLC3Q8N755 202 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 BEND7Q8N7W2 519 aaPredicted RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 SMPDL3BQ92485 455 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 ARHGDIGQ99819 225 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 B4GALT5O43286 388 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 CLDN11O75508 207 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 EPHX1P07099 455 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 KIR2DL3P43628 341 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 FNDC3BQ53EP0 1204 aaKnown RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 LIPIQ6XZB0 460 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 IL34Q6ZMJ4 242 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 FJX1Q86VR8 437 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 APOBEC3FQ8IUX4 373 aaKnown RBP8.25□□□□□ -1.09
YBX3-208ENST00000540447 KIAA0319LQ8IZA0 1049 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 GABRG1Q8N1C3 465 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 HSD17B11Q8NBQ5 300 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 OR8U1Q8NH10 309 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 ISL2Q96A47 359 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 SCML1Q9UN30 329 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 TMEM2Q9UHN6 1383 aa8.25□□□□□ -1.09
YBX3-208ENST00000540447 MADDQ8WXG6 1647 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 GLI2P10070 1586 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 ZNF487B1APH4 448 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 RNASEK-C17orf49H0YIS7 233 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SIAH2O43255 324 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
YBX3-208ENST00000540447 TSPAN12O95859 305 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SPP1P10451 314 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 TGFBR1P36897 503 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 GNG10P50151 68 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 RGMBQ6NW40 437 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 FAM129CQ86XR2 697 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 DNERQ8NFT8 737 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 LGALS14Q8TCE9 139 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SLC41A2Q96JW4 573 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 CPNE7Q9UBL6 633 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 GHRLQ9UBU3 117 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SLC7A11Q9UPY5 501 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SLIT1O75093 1534 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 ATRNL1Q5VV63 1379 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 A6NIZ1 184 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 TMEM200CA6NKL6 621 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 ZFP92A6NM28 416 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 GPR171O14626 319 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SLC35G6P0C7Q6 338 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 HLA-DOBP13765 273 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 IL12BP29460 328 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 TRHRP34981 398 aaPredicted RBP8.24□□□□□ -1.09
YBX3-208ENST00000540447 THPOP40225 353 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 POLR2HP52434 150 aaKnown RBP8.24□□□□□ -1.09
YBX3-208ENST00000540447 RAP1BP61224 184 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 SP2Q02086 613 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 GAB1Q13480 694 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 HSD17B13Q7Z5P4 300 aaPredicted RBP8.24□□□□□ -1.09
YBX3-208ENST00000540447 MON1AQ86VX9 555 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 C4orf36Q96KX1 117 aa8.24□□□□□ -1.09
YBX3-208ENST00000540447 TMEM121BQ9BXQ6 578 aaPredicted RBP8.24□□□□□ -1.09
YBX3-208ENST00000540447 SEMA4GQ9NTN9 838 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms