RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PXKQ7Z7A4 578 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 C12orf40Q86WS4 652 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 SRFBP1Q8NEF9 429 aaKnown RBP12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 OR13C2Q8NGS9 318 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 SARGQ9BW04 601 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 MAB21L2Q9Y586 359 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 KCNMB2Q9Y691 235 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 TP53BP1Q12888 1972 aaPredicted RBP12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 SYT5O00445 386 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 BHLHE40O14503 412 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 SC5DO75845 299 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 UBL3O95164 117 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 MT-ND5P03915 603 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 HMGN1P05114 100 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 ICAM2P13598 275 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 BDH1Q02338 343 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 IKZF1Q13422 519 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 TCEAL5Q5H9L2 206 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 STPG1Q5TH74 334 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 OR51A7Q8NH64 312 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 HAVCR2Q8TDQ0 301 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 LINC00615Q96LM1 132 aaPredicted RBP12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 SFXN2Q96NB2 322 aa12.92□□□□□ -0.34
SCNN1A-215ENST00000540037 C17orf113A0A1B0GUU1 675 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 FCER2P06734 321 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 EPXP11678 715 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 RAD52P43351 418 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 SHC2P98077 582 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ZNF836Q6ZNA1 936 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 FRRS1Q6ZNA5 592 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 LGALS14Q8TCE9 139 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ELP4Q96EB1 424 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 PRSS27Q9BQR3 290 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 JAM3Q9BX67 310 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 SYNDIG1Q9H7V2 258 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 SIDT1Q9NXL6 827 aaKnown RBP12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 KLK11Q9UBX7 282 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 A0A1B0GVI7 797 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 UNC119BA6NIH7 251 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 LRRN3E7EW58 273 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ERGP11308 486 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 CLDN12P56749 244 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 OPCMLQ14982 345 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 GPR68Q15743 365 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 FAAH2Q6GMR7 532 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ELMOD3Q96FG2 381 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 IFT27Q9BW83 186 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 REG4Q9BYZ8 158 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 LRRN3Q9H3W5 708 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 PRDM7Q9NQW5 492 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 STON1Q9Y6Q2 735 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 COL4A6Q14031 1691 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 CXorf51AA0A1B0GTR3 108 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 TFP02787 698 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 HIST1H1TP22492 207 aaPredicted RBP12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 HTR2AP28223 471 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ZNF136P52737 540 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 NTHL1P78549 312 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 FOXK2Q01167 660 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 MAPK14Q16539 360 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 GID4Q8IVV7 300 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 CMTM4Q8IZR5 234 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 OR56B4Q8NH76 319 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 NXPE3Q969Y0 559 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 MS4A6EQ96DS6 147 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 OR14A2Q96R54 314 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 C1QTNF2Q9BXJ5 285 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 WDR26Q9H7D7 661 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 ZNF443Q9Y2A4 671 aaPredicted RBP12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 SPTBP11277 2137 aa12.91□□□□□ -0.34
SCNN1A-215ENST00000540037 A0A087WV48 116 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 TCRBV16S1A1N1A0A5B0 115 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 ARPC1BO15143 372 aaKnown RBP12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 SIGLEC5O15389 551 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 PCCBP05166 539 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 SBK2P0C263 348 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 KIAA1024LP59773 190 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 OC90Q02509 493 aaPredicted RBP12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 SIGLEC14Q08ET2 396 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 CRMP1Q14194 572 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 SLC25A25Q6KCM7 469 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 NHLRC1Q6VVB1 395 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 TMEM64Q6YI46 380 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 ESX1Q8N693 406 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 LHFPL5Q8TAF8 219 aa12.9□□□□□ -0.34
SCNN1A-215ENST00000540037 SMPDL3BQ92485 455 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms