RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 WDR45BQ5MNZ6 344 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 USP53Q70EK8 1073 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 OR7G2Q8NG99 324 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 KAT2AQ92830 837 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 CDS1Q92903 461 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 C4orf36Q96KX1 117 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 STACQ99469 402 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 KIR3DX1Q9H7L2 352 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 ADGRL4Q9HBW9 690 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 DUSP22Q9NRW4 184 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 CLDND1Q9NY35 253 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 OR6C2Q9NZP2 312 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 APOBEC3BQ9UH17 382 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 MRPS23Q9Y3D9 190 aaKnown RBP12.3□□□□□ -0.44
UBE3B-209ENST00000539584 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
UBE3B-209ENST00000539584 MUC22E2RYF6 1773 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-209ENST00000539584 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
UBE3B-209ENST00000539584 TRAV6A0A075B6T7 132 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 URADA6NGE7 173 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 PDGFAP04085 211 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 CLTBP09497 229 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 CEBPBP17676 345 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF10P21506 573 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-209ENST00000539584 RAB8AP61006 207 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 BTN3A2P78410 334 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 NTHL1P78549 312 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 SLC3A1Q07837 685 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 SUZ12Q15022 739 aaKnown RBP12.29□□□□□ -0.44
UBE3B-209ENST00000539584 AMZ1Q400G9 498 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 EXOSC6Q5RKV6 272 aaKnown RBP12.29□□□□□ -0.44
UBE3B-209ENST00000539584 ARHGAP11AQ6P4F7 1023 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 RTL4Q6ZR62 310 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 GRASPQ7Z6J2 395 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-209ENST00000539584 SLITRK4Q8IW52 837 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 POMGNT2Q8NAT1 580 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 SMIM4Q8WVI0 70 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 SMPDL3BQ92485 455 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 HSD17B8Q92506 261 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 NXPE2Q96DL1 559 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 BPIFA2Q96DR5 249 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 ART5Q96L15 291 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 NECTIN4Q96NY8 510 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 LRRC3BQ96PB8 259 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 SERINC2Q96SA4 455 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 IFT27Q9BW83 186 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 XKR8Q9H6D3 395 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 HEXA-AS1Q9H8Q6 139 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 ZMIZ1Q9ULJ6 1067 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 NTNG1Q9Y2I2 539 aa12.29□□□□□ -0.44
UBE3B-209ENST00000539584 A0A087WV62 115 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 OR5K3A6NET4 321 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GPR171O14626 319 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 FKTNO75072 461 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 PTP4A3O75365 173 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TPPPO94811 219 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TGM6O95932 706 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 OR2T7P0C7T2 308 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 EPXP11678 715 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 MAKP20794 623 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GIFP27352 417 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 NDUFS1P28331 727 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 RBM34P42696 430 aaKnown RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 OR10A3P58181 314 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF85Q03923 595 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ILF3Q12906 894 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TOR2AQ5JU69 321 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GPR139Q6DWJ6 353 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 FAM111BQ6SJ93 734 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 OR8H3Q8N146 312 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SPERTQ8NA61 448 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 OR2T27Q8NH04 317 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 C15orf40Q8WUR7 153 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GHSRQ92847 366 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SLC22A18Q96BI1 424 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SMIM19Q96E16 107 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF559Q9BR84 538 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 PLEKHA1Q9HB21 404 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 KLHL1Q9NR64 748 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 UBQLN2Q9UHD9 624 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 C19orf53Q9UNZ5 99 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 HEATR5BQ9P2D3 2071 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 CDHR4A6H8M9 788 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TRABD2BA6NFA1 517 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 J3QLW9 94 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 DVL2O14641 736 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GPRIN2O60269 458 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 TSC22D2O75157 780 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 PCDH8O95206 1070 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 LYPD3O95274 346 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 NTN1O95631 604 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 GUSBP08236 651 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 UCHL1P09936 223 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 SLC35G6P0C7Q6 338 aa12.28□□□□□ -0.44
UBE3B-209ENST00000539584 ZNF19P17023 458 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms