RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 NTN1O95631 604 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 DBIP07108 87 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 THBS1P07996 1170 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 LINGO3P0C6S8 592 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ETS2P15036 469 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 IL11P20809 199 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ELAVL4P26378 380 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ACAA2P42765 397 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 MASP1P48740 699 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 GFRA1P56159 465 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 PLGLB1Q02325 96 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 CHRNB3Q05901 458 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 FAM98BQ52LJ0 330 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 WIPI1Q5MNZ9 446 aaPredicted RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 RNF220Q5VTB9 566 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 FAM180AQ6UWF9 173 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 PATL1Q86TB9 770 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 YRDCQ86U90 279 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 TSPYL5Q86VY4 417 aaPredicted RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 LACC1Q8IV20 430 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ADGRG5Q8IZF4 528 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ZNF614Q8N883 585 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 OR5M1Q8NGP8 315 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 GPR119Q8TDV5 335 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 OIT3Q8WWZ8 545 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 PMM1Q92871 262 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 SLCO4A1Q96BD0 722 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 PYURFQ96I23 114 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 RNF145Q96MT1 663 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ACKR4Q9NPB9 350 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ADPRHL2Q9NX46 363 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 STOML1Q9UBI4 398 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 SAMD4AQ9UPU9 718 aaKnown RBP11.78□□□□□ -0.52
CCDC42-202ENST00000539522 ANGPT4Q9Y264 503 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 M0QX08 132 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 ETV2O00321 342 aaPredicted RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 TFECO14948 347 aaPredicted RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 ZNF264O43296 627 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 HCRTR2O43614 444 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 SEMA7AO75326 666 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 SERPINA1P01009 418 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 CSTAP01040 98 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 CRYABP02511 175 aaKnown RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 UBTFL6P0CB48 400 aaPredicted RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 GKN3PP0CG01 181 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 UBL4AP11441 157 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 GDF1P27539 372 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 SRD5A2P31213 254 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 ZNF136P52737 540 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 CLDN15P56746 228 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 NPTX1Q15818 432 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 PLPPR5Q32ZL2 321 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 EMC4Q5J8M3 183 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 DHRS4L2Q6PKH6 230 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 CBLL1Q75N03 491 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 EIF3MQ7L2H7 374 aaKnown RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 GRAMD2AQ8IUY3 354 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 SMYD1Q8NB12 490 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 ZNF527Q8NB42 609 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 FAM98AQ8NCA5 519 aaKnown RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 PRR14Q9BWN1 585 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 LAT2Q9GZY6 243 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 MAGIXQ9H6Y5 334 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 MED17Q9NVC6 651 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 QPCTLQ9NXS2 382 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 AURKCQ9UQB9 309 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 SLC6A5Q9Y345 797 aa11.77□□□□□ -0.53
CCDC42-202ENST00000539522 MRPS18CQ9Y3D5 142 aaKnown RBP11.77□□□□□ -0.53
CCDC42-202ENST00000539522 DNAJC13O75165 2243 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 A0A1B0GTH9 108 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 ANKUB1A6NFN9 424 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 KDM4EB2RXH2 506 aaPredicted RBP11.76□□□□□ -0.53
CCDC42-202ENST00000539522 CDC40O60508 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC42-202ENST00000539522 EIF4E2O60573 245 aaKnown RBP11.76□□□□□ -0.53
CCDC42-202ENST00000539522 SERPINB7O75635 380 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 PRKD3O94806 890 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 RAP2AP10114 183 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 FCGR1AP12314 374 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 EDN3P14138 238 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 IL7RP16871 459 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 FUT4P22083 530 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 TCEA1P23193 301 aaKnown RBP11.76□□□□□ -0.53
CCDC42-202ENST00000539522 DPP4P27487 766 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 PRKAR1BP31321 381 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 KCNJ5P48544 419 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 P2RX1P51575 399 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 DLX5P56178 289 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 DSCR4P56555 118 aaPredicted RBP11.76□□□□□ -0.53
CCDC42-202ENST00000539522 SELENOWP63302 87 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 HOXC5Q00444 222 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 CRYZQ08257 329 aaKnown RBP11.76□□□□□ -0.53
CCDC42-202ENST00000539522 SLC10A1Q14973 349 aa11.76□□□□□ -0.53
CCDC42-202ENST00000539522 ZNF311Q5JNZ3 666 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms