RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 LSMEM1Q8N8F7 131 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 IGFLR1Q9H665 355 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 FGF20Q9NP95 211 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 HINT3Q9NQE9 182 aaKnown RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 RDH8Q9NYR8 311 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TNFRSF10DQ9UBN6 386 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 B8ZZF3 427 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 J3QLW9 94 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 PSMD9O00233 223 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 RNGTTO60942 597 aaKnown RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF19P17023 458 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC6A1P30531 599 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 BTCP35070 178 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 PRR5P85299 388 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 RAB40BQ12829 278 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TSPAN31Q12999 210 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ST3GAL2Q16842 350 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 EOGTQ5NDL2 527 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 FBXO42Q6P3S6 717 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 CEACAM19Q7Z692 300 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 GRAMD2AQ8IUY3 354 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TMEFF1Q8IYR6 380 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ARIH2OSQ8N7S6 290 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 C17orf47Q8NEP4 570 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 DNAJA4Q8WW22 397 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 CDS1Q92903 461 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 SIPA1Q96FS4 1042 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC38A2Q96QD8 506 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 KCNJ15Q99712 375 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 SOSTQ9BQB4 213 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 CACNG6Q9BXT2 260 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 SFXN1Q9H9B4 322 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 NANSQ9NR45 359 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 KLF15Q9UIH9 416 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 CACNG2Q9Y698 323 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TRDV1A0A1B0GX56 115 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 P2RX6O15547 441 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 SEC14L5O43304 696 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 KLF4O43474 513 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 PLRG1O43660 514 aaKnown RBP11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 DNASE1P24855 282 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 SELENOPP49908 381 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 ATP12AP54707 1039 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 RGS1Q08116 209 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 CCNJQ5T5M9 372 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 MZT2AQ6P582 158 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 TRILQ7L0X0 811 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 KLHL36Q8N4N3 616 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 POGLUT1Q8NBL1 392 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 GNPDA2Q8TDQ7 276 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 MYADMQ96S97 322 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 METTL17Q9H7H0 456 aaPredicted RBP11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 KCMF1Q9P0J7 381 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC9B1P1A6NJY1 282 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 KDM4EB2RXH2 506 aaPredicted RBP11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 SYT5O00445 386 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 CHST10O43529 356 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 TSPAN9O75954 239 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 DHFRP00374 187 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 RAF1P04049 648 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 TCRBP04435 133 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 GSTM3P21266 225 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 GDI1P31150 447 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 ADPRHP54922 357 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 SIM1P81133 766 aaPredicted RBP11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 TIGD3Q6B0B8 471 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 HEPHL1Q6MZM0 1159 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 RASSF6Q6ZTQ3 369 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 GDF7Q7Z4P5 450 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 ARL14Q8N4G2 192 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 LINC00471Q8N535 108 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 ZBTB44Q8NCP5 570 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 TRMT10AQ8TBZ6 339 aaKnown RBP11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 GIMAP1Q8WWP7 306 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 RAB11FIP5Q9BXF6 653 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 PRKAG2Q9UGJ0 569 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC13A4Q9UKG4 626 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 CACNA1IQ9P0X4 2223 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 LAMA1P25391 3075 aa11.65□□□□□ -0.54
SFSWAP-208ENST00000539506 TP53BP1Q12888 1972 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 NPIPA5A0A0B4J1W7 369 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM129A0AVI4 362 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 CHURC1-FNTBB4DL54 471 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 NPIPA7E9PJI5 369 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 STK25O00506 426 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 SURF4O15260 269 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 LINC01565O15544 149 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 CTSVO60911 334 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 APODP05090 189 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 NPIPA8P0DM63 369 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PRG2P13727 222 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms