RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TYW3Q6IPR3 259 aaKnown RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 ZNF474Q6S9Z5 364 aaPredicted RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 FRRS1Q6ZNA5 592 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 MAVSQ7Z434 540 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 GTF2IRD2Q86UP8 949 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ZNF619Q8N2I2 560 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 FBXO27Q8NI29 283 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 XAGE5Q8WWM1 108 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ST8SIA1Q92185 356 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ZNF75CPQ92670 426 aaPredicted RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 PMM1Q92871 262 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ROPN1LQ96C74 230 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ATP6V1G3Q96LB4 118 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 TRNT1Q96Q11 434 aaKnown RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 TMEM185BQ9H7F4 350 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 GP6Q9HCN6 339 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 KCNE5Q9UJ90 142 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 MKLN1Q9UL63 735 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 MED12LQ86YW9 2145 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 TEP1Q99973 2627 aaKnown RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 CENPVL1A0A0U1RR11 272 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 HMGN4O00479 90 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 UBDO15205 165 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 TGDSO95455 350 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 KRT75O95678 551 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 NID1P14543 1247 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 POU2F1P14859 743 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 CD1EP15812 388 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 PGCP20142 388 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 SFTPDP35247 375 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 MRPL19P49406 292 aaKnown RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 CCR4P51679 360 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 CTBP2P56545 445 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 CARD18P57730 90 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 QPRTQ15274 297 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 RNPS1Q15287 305 aaKnown RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 TOMM34Q15785 309 aaPredicted RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 NDUFAF6Q330K2 333 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 PPP4R4Q6NUP7 873 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 C3orf33Q6P1S2 294 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 RNF130Q86XS8 419 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 CDC20BQ86Y33 519 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 CMIPQ8IY22 773 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 RNF128Q8TEB7 428 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 ZFP90Q8TF47 636 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 TMEM234Q8WY98 164 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 OSTF1Q92882 214 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 RAB8BQ92930 207 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 REXO5Q96IC2 774 aaKnown RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 OPN3Q9H1Y3 402 aaPredicted RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 RMND5AQ9H871 391 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 FANCFQ9NPI8 374 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 EXOSC3Q9NQT5 275 aaKnown RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 PLSCR4Q9NRQ2 329 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 USH1CQ9Y6N9 552 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 HIVEP1P15822 2718 aa10.35□□□□□ -0.75
RTN3-209ENST00000538995 NUP214P35658 2090 aaPredicted RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
RTN3-209ENST00000538995 ABCA4P78363 2273 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 UQCRHLA0A096LP55 91 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 C9JVG2 144 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 C16orf97H3BN30 126 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 RFXANKO14593 260 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 CASKO14936 926 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 EFNA2O43921 213 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 DIAPH2O60879 1101 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 H6PDO95479 791 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 HRGP04196 525 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 UBTFL6P0CB48 400 aaPredicted RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 ZCCHC18P0CG32 403 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 SHC1P29353 583 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 SLC7A1P30825 629 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 CCKARP32238 428 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 UGT2B10P36537 528 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 PGM1P36871 562 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 CDKN2CP42773 168 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 RNF144AP50876 292 aaPredicted RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 CASP9P55211 416 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 FAM27E3Q08E93 113 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 MAPK14Q16539 360 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 GPAT3Q53EU6 434 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 FBXW10Q5XX13 1052 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 EPGNQ6UW88 154 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 LRRC74BQ6ZQY2 392 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 ZNF621Q6ZSS3 439 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 MIER2Q8N344 545 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 SLC43A2Q8N370 569 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 RFWD2Q8NHY2 731 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 LRRC8CQ8TDW0 803 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 SLC25A43Q8WUT9 341 aaPredicted RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 OR52B2Q96RD2 323 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 TACO1Q9BSH4 297 aaKnown RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 INPP5KQ9BT40 448 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 THUMPD3Q9BV44 507 aaKnown RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 COQ10BQ9H8M1 238 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 VIPAS39Q9H9C1 493 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 SERINC1Q9NRX5 453 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms