RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 NKX2-6A6NCS4 301 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 CLDN24A6NM45 220 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 H0Y3Z8 333 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 SYT5O00445 386 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 FBP2O00757 339 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 TNFSF13O75888 250 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 CSTAP01040 98 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 IL2RAP01589 272 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 CRHP06850 196 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 NUDT7P0C024 238 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 POU3F2P20265 443 aaPredicted RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 CTSSP25774 331 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 EEFSECP57772 596 aaKnown RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 DSTNP60981 165 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 FOXF2Q12947 444 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 ADRM1Q16186 407 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 GPAT3Q53EU6 434 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 PLXDC2Q6UX71 529 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 EIF3MQ7L2H7 374 aaKnown RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 C10orf82Q8WW14 230 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 CPPED1Q9BRF8 314 aaPredicted RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 THUMPD3Q9BV44 507 aaKnown RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 QRSL1Q9H0R6 528 aaKnown RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 KCNJ16Q9NPI9 418 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 ACER3Q9NUN7 267 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 DNAJB12Q9NXW2 375 aaKnown RBP12.32□□□□□ -0.44
CD9-208ENST00000538834 KLHL14Q9P2G3 628 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 P2RX2Q9UBL9 471 aa12.32□□□□□ -0.44
CD9-208ENST00000538834 A0A0G2JPF8 293 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 HNRNPCL2B2RXH8 293 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 HNRNPCL3B7ZW38 293 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 H3BML4 177 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 GTPBP1O00178 669 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 NR5A2O00482 541 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 HNRNPCL1O60812 293 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 ANP32DO95626 131 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 DBIP07108 87 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 THBS1P07996 1170 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 HNRNPCL4P0DMR1 293 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 TROVE2P10155 538 aaKnown RBP eCLIP12.31□□□□□ -0.44
CD9-208ENST00000538834 ARAFP10398 606 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 NCF2P19878 526 aaPredicted RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 TCEA1P23193 301 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 SHC1P29353 583 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 OPRM1P35372 400 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 RNF144AP50876 292 aaPredicted RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 ZNF41P51814 821 aaPredicted RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 ARFIP2P53365 341 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 SESN3P58005 492 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 EEF1A1P68104 462 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 SRYQ05066 204 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 FOXF1Q12946 379 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 CBFBQ13951 182 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 QPRTQ15274 297 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 C6orf10Q5SRN2 563 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 ESPNLQ6ZVH7 1005 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 OR10Q1Q8NGQ4 319 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 FBXO27Q8NI29 283 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 FIG4Q92562 907 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 CNOT9Q92600 299 aaKnown RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 TMEM19Q96HH6 336 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 ANKRD27Q96NW4 1050 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 CCDC106Q9BWC9 280 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 TRIM8Q9BZR9 551 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 RAD21L1Q9H4I0 556 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 TMEM38AQ9H6F2 299 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 COQ10BQ9H8M1 238 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 MRGBPQ9NV56 204 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 CALML5Q9NZT1 146 aa12.31□□□□□ -0.44
CD9-208ENST00000538834 LEF1Q9UJU2 399 aaPredicted RBP12.31□□□□□ -0.44
CD9-208ENST00000538834 CDHR4A6H8M9 788 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 GMFGO60234 142 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 CGAP01215 116 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 SNRPB2P08579 225 aaKnown RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 NR2F1P10589 423 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 PRF1P14222 555 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 ETS2P15036 469 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 PPIBP23284 216 aaKnown RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 ACAA2P42765 397 aaKnown RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 CRATP43155 626 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 KIR2DL2P43627 348 aaPredicted RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 GZMMP51124 257 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 CRISP3P54108 245 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 KLF10Q13118 480 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 COQ5Q5HYK3 327 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 RNF220Q5VTB9 566 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 EEF1A1P5Q5VTE0 462 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 NET1Q7Z628 596 aaPredicted RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 LILRA2Q8N149 483 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 SLC35B4Q969S0 331 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 ZNF845Q96IR2 970 aaPredicted RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 SFXN3Q9BWM7 321 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 ADAM19Q9H013 955 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms