RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 AP1S1P61966 158 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 MAT1AQ00266 395 aaKnown RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 E2F1Q01094 437 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 DEFA5Q01523 94 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 IRF8Q02556 426 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ZNF763Q0D2J5 394 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 CNTN1Q12860 1018 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 TSPAN31Q12999 210 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 DUSP4Q13115 394 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 CHIT1Q13231 466 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 GAB1Q13480 694 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 OR2F1Q13607 317 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 GPR68Q15743 365 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 UBE2NLQ5JXB2 153 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 OR2G6Q5TZ20 316 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 AADACL4Q5VUY2 407 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ZNF660Q6AZW8 331 aaPredicted RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 RGMBQ6NW40 437 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 PAQR6Q6TCH4 344 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 UBE2R2Q712K3 238 aaPredicted RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 GAREM2Q75VX8 874 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 CHST9Q7L1S5 443 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ABHD13Q7L211 337 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 JAZF1Q86VZ6 243 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 PAQR7Q86WK9 346 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 CIR1Q86X95 450 aaPredicted RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 SLC43A2Q8N370 569 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ACBD7Q8N6N7 88 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 HORMAD2Q8N7B1 307 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 PNPLA1Q8N8W4 532 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 OR11G2Q8NGC1 345 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 TRMT10AQ8TBZ6 339 aaKnown RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 THEM6Q8WUY1 208 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 RAB40AQ8WXH6 277 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ASB12Q8WXK4 309 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 NEURL3Q96EH8 262 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 WDR34Q96EX3 536 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ZDHHC12Q96GR4 267 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 TOX2Q96NM4 488 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 TSNAXQ99598 290 aaKnown RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 ZNF649Q9BS31 505 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 WRAP53Q9BUR4 548 aaKnown RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 ARL6Q9H0F7 186 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 ENKD1Q9H0I2 346 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 CXCL16Q9H2A7 254 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 SEBOXQ9HB31 216 aaPredicted RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 GSN-AS1Q9NRJ2 163 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 TAS2R3Q9NYW6 316 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 OR6C2Q9NZP2 312 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 H2AFY2Q9P0M6 372 aaPredicted RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 METTL1Q9UBP6 276 aaKnown RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 AFF4Q9UHB7 1163 aaKnown RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 OPN4Q9UHM6 478 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 GPR160Q9UJ42 338 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 FBXW2Q9UKT8 454 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 EDARQ9UNE0 448 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 RASD1Q9Y272 281 aa6.23□□□□□ -1.41
USP28-207ENST00000538475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
USP28-207ENST00000538475 A0A0B4J203 849 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 A0A0G2JK05 382 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 ANKRD20A5PA0PJZ0 165 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 OR14I1A6ND48 311 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 FAM74A7A6NL05 159 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 F5H5P2 479 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 F5H5T6 163 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 J3KTA2 159 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 J3QRE1 110 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 M0R129 80 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 SYT5O00445 386 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 YY2O15391 372 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 SGCEO43556 437 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 TLR5O60602 858 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 CLDN11O75508 207 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 KRT33AO76009 404 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 RECKO95980 971 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 MOCS2O96007 188 aaPredicted RBP6.22□□□□□ -1.41
USP28-207ENST00000538475 IFNGP01579 166 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 CD8AP01732 235 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 HPXP02790 462 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 MMP10P09238 476 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 FBP1P09467 338 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 PRSS56P0CW18 603 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 TFPIP10646 304 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 SLC25A4P12235 298 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 BTF3P20290 206 aaKnown RBP6.22□□□□□ -1.41
USP28-207ENST00000538475 ATP5A1P25705 553 aaKnown RBP6.22□□□□□ -1.41
USP28-207ENST00000538475 AQP1P29972 269 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 MAT2AP31153 395 aaKnown RBP6.22□□□□□ -1.41
USP28-207ENST00000538475 CSKP41240 450 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 GDF5P43026 501 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 CDKN1CP49918 316 aaPredicted RBP6.22□□□□□ -1.41
USP28-207ENST00000538475 GDI2P50395 445 aaKnown RBP6.22□□□□□ -1.41
USP28-207ENST00000538475 CCR8P51685 355 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 LIM2P55344 173 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 HBA1P69905 142 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 RNF4P78317 190 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 EGR3Q06889 387 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 ECH1Q13011 328 aa6.22□□□□□ -1.41
USP28-207ENST00000538475 GRM7Q14831 915 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms