RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SMAD9O15198 467 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 RGS14O43566 566 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 LY6HO94772 140 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 PRKCAP17252 672 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 COX5AP20674 150 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 USF1P22415 310 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 LCN1P31025 176 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 FABP6P51161 128 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 P2RX1P51575 399 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 POU6F2P78424 691 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 CHRNEQ04844 493 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 SELENBP1Q13228 472 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 LRIG3Q6UXM1 1119 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 B3GLCTQ6Y288 498 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 TRIM46Q7Z4K8 759 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF100Q8IYN0 542 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 TMCO5AQ8N6Q1 288 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF614Q8N883 585 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 CLHC1Q8NHS4 586 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 CDS1Q92903 461 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF524Q96C55 264 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 RADILQ96JH8 1075 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 TSSK3Q96PN8 268 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 OR5B2Q96R09 309 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 DHRS9Q9BPW9 319 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 BTBD2Q9BX70 525 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 IQCGQ9H095 443 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 SH3BP4Q9P0V3 963 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 A0A087WUV0 522 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 GTPBP1O00178 669 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 GSTA1P08263 222 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 DHRS4L1P0CG22 281 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 ATP6V1C1P21283 382 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 CCR4P51679 360 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 RAC3P60763 192 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 LASP1Q14847 261 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 CDC73Q6P1J9 531 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 P2RY8Q86VZ1 359 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF433Q8N7K0 673 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF527Q8NB42 609 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 GPR119Q8TDV5 335 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 FMO2Q99518 471 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 REEP4Q9H6H4 257 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 ANKZF1Q9H8Y5 726 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 TNFRSF12AQ9NP84 129 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 NTMQ9P121 344 aa12.34□□□□□ -0.43
SMARCA4-206ENST00000538456 ARFGEF3Q5TH69 2177 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 GOLGA8QA0A0J9YX86 632 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CIB4A0PJX0 185 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 SLC35F4A4IF30 521 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 GOLGA8OA6NCC3 632 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 GOLGA8NF8WBI6 632 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 H3BNH8 94 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 H7C417 338 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 M0R1B8 84 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CYTIPO60759 359 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 H6PDO95479 791 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 HSPA4LO95757 839 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 HMGN2P05204 90 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 SDC1P18827 310 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CD40P25942 277 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 THBS2P35442 1172 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 SUMO3P55854 103 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 GGTLC2Q14390 218 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 KIAA0040Q15053 153 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 KLHL26Q53HC5 615 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 ARL13AQ5H913 290 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 FAM120AOSQ5T036 256 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 KLHL17Q6TDP4 642 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 SSX8Q7RTT4 187 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 ZNF572Q7Z3I7 529 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 GALNT5Q7Z7M9 940 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 IFT81Q8WYA0 676 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 ZNF75CPQ92670 426 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 C3orf49Q96BT1 292 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 FAM120BQ96EK7 910 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 MRGPRX4Q96LA9 322 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CCT7Q99832 543 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 C1QTNF6Q9BXI9 259 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 QRSL1Q9H0R6 528 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 ZCCHC3Q9NUD5 404 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 BAIAP2L1Q9UHR4 511 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 MGAT4BQ9UQ53 548 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 CCL27Q9Y4X3 112 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 ACTL7BQ9Y614 415 aa12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-206ENST00000538456 LOC100289279A0A1B0GTE1 492 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 ZNF724A8MTY0 619 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 PGM3O95394 542 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 PTAFRP25105 342 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms