RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FAF1Q9UNN5 650 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 EXO1Q9UQ84 846 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CFL2Q9Y281 166 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CLDN16Q9Y5I7 305 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 AP4B1Q9Y6B7 739 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CROCCQ5TZA2 2017 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 A0A087WV62 115 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 RNF103-CHMP3A0A140T963 221 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 C2orf92A0A1B0GVN3 265 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 A0A1W2PPL8 197 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 A0A1W2PS29 197 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 MARCH11A6NNE9 402 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 E9PLN8 166 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 MASP2O00187 686 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PLOD2O00469 737 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 RFXANKO14593 260 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 HNRNPRO43390 633 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 EMC8O43402 210 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PLOD3O60568 738 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PFDN1O60925 122 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR2J2O76002 312 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SPDEFO95238 335 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PGM3O95394 542 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 C6orf47O95873 294 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 IGKV3-11P04433 115 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CELA2AP08217 269 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ADH4P08319 380 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 IFI6P09912 130 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ITGAMP11215 1152 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SFTPCP11686 197 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ME2P23368 584 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 KRT20P35900 424 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 FRKP42685 505 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CCT3P49368 545 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PRIM2P49643 509 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TMED10P49755 219 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CDK9P50750 372 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ANXA11P50995 505 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 GPR143P51810 404 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PRKAG1P54619 331 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SLC37A1P57057 533 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 HBA1P69905 142 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PSPHP78330 225 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 POU6F2P78424 691 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OC90Q02509 493 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 Q0VFX4 171 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 FUT7Q11130 342 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ART3Q13508 389 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TP53BP2Q13625 1128 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 EXOSC7Q15024 291 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CEBPEQ15744 281 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 MEP1AQ16819 746 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 VPS26BQ4G0F5 336 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 NADK2Q4G0N4 442 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TRMT12Q53H54 448 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF628Q5EBL2 1059 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PIGGQ5H8A4 983 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ACER2Q5QJU3 275 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ATAD3BQ5T9A4 648 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PPP4R4Q6NUP7 873 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ISLR2Q6UXK2 745 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TMEM64Q6YI46 380 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF621Q6ZSS3 439 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 MSANTD1Q6ZTZ1 278 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 RPS19BP1Q86WX3 136 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CROCCP3Q8IVE0 287 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CLECL1Q8IZS7 167 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 PGAM4Q8N0Y7 254 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TAGAPQ8N103 731 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR2L13Q8N349 312 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TMEM156Q8N614 296 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CPSF7Q8N684 471 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SIRT6Q8N6T7 355 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 APCDD1LQ8NCL9 501 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 NFAM1Q8NET5 270 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 FDCSPQ8NFU4 85 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 TNIP2Q8NFZ5 429 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR7G2Q8NG99 324 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR52R1Q8NGF1 315 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR8K3Q8NH51 312 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR5AK3PQ8NH89 298 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 C16orf52Q8NHV5 167 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 RP9Q8TA86 221 aaKnown RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 C9orf43Q8TAL5 461 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SUN3Q8TAQ9 357 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 NUBPLQ8TB37 319 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SLC22A8Q8TCC7 542 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 SFXN5Q8TD22 340 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ELP5Q8TE02 316 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 DOK4Q8TEW6 326 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF721Q8TF20 911 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 OR5P2Q8WZ92 322 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 VPS33AQ96AX1 596 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 MOAP1Q96BY2 351 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CTHRC1Q96CG8 243 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 RCN3Q96D15 328 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ELP4Q96EB1 424 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF354BQ96LW1 612 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CNBD2Q96M20 576 aa3.96□□□□□ -1.78
SNHG1-208ENST00000538266 CCDC115Q96NT0 180 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms