RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ULK3Q6PHR2 472 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 CARFQ8N187 725 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 CADM2Q8N3J6 435 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 SPEM1Q8N4L4 309 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 CAMKK1Q8N5S9 505 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 ZNF615Q8N8J6 731 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 C1orf216Q8TAB5 229 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 SLC25A46Q96AG3 418 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 MED18Q9BUE0 208 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 SP140LQ9H930 580 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 CUTCQ9NTM9 273 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 UCKL1Q9NWZ5 548 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 QPCTLQ9NXS2 382 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 LRIT1Q9P2V4 623 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 WNT16Q9UBV4 365 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 GMEB2Q9UKD1 530 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 GSTK1Q9Y2Q3 226 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 SF3B6Q9Y3B4 125 aaKnown RBP14.44□□□□□ -0.1
MKS1-204ENST00000537529 TMEM184BQ9Y519 407 aaPredicted RBP14.44□□□□□ -0.1
MKS1-204ENST00000537529 PCDHGB6Q9Y5F9 930 aa14.44□□□□□ -0.1
MKS1-204ENST00000537529 TRAV27A0A087WT01 109 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 OR2W5A6NFC9 320 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 SERINC4A6NH21 518 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 PRR23D1E9PI22 279 aaPredicted RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 PLD2O14939 933 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 PTP4A3O75365 173 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 PRR23D2P0DMB1 279 aaPredicted RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 SLC6A6P31641 620 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ARL4DP49703 201 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 GPR143P51810 404 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ZNF791Q3KP31 576 aaPredicted RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 PTCRAQ6ISU1 281 aaPredicted RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 THSD4Q6ZMP0 1018 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 TMPRSS11AQ6ZMR5 421 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 OAFQ86UD1 273 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 GATAD2AQ86YP4 633 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 SIRT6Q8N6T7 355 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 OR51G2Q8NGK0 314 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 HLA-CQ95604 372 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 NACC2Q96BF6 587 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 COQ7Q99807 217 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ENKD1Q9H0I2 346 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ZNF229Q9UJW7 825 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 MMACHCQ9Y4U1 282 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 SYNDIG1LA6NDD5 238 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 SLC22A31A6NKX4 558 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 C17orf105B2RV13 164 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 TMEM150CB9EJG8 249 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 J3QRE1 110 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ADAM11O75078 769 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 RFPL3O75679 317 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 OR2B3O76000 313 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 SNX4O95219 450 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 CSTAP01040 98 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 CSNK1EP49674 416 aaKnown RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 STEAP3Q658P3 488 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 KIRREL2Q6UWL6 708 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ZNF440Q8IYI8 595 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ACBD7Q8N6N7 88 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 OR51A7Q8NH64 312 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 OR4C6Q8NH72 309 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 ZNF649Q9BS31 505 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 CCDC32Q9BV29 185 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 MED20Q9H944 212 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 POLE4Q9NR33 117 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 SLC35A3Q9Y2D2 325 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 YARS2Q9Y2Z4 477 aaKnown RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 CAB39Q9Y376 341 aaPredicted RBP14.43□□□□□ -0.1
MKS1-204ENST00000537529 MAU2Q9Y6X3 613 aa14.43□□□□□ -0.1
MKS1-204ENST00000537529 TRDV1A0A1B0GX56 115 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 RGS5O15539 181 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 IFNGP01579 166 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 CLPSP04118 112 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 ZNF3P17036 446 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 FGF9P31371 208 aaPredicted RBP14.42□□□□□ -0.1
MKS1-204ENST00000537529 TNFSF8P32971 234 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 SLC9A3P48764 834 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 HSD11B2P80365 405 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 MXD1Q05195 221 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 KRR1Q13601 381 aaKnown RBP14.42□□□□□ -0.1
MKS1-204ENST00000537529 KCNAB1Q14722 419 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 ARHGAP11AQ6P4F7 1023 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 CD200R1LQ6Q8B3 271 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 ZNF322Q6U7Q0 402 aaPredicted RBP14.42□□□□□ -0.1
MKS1-204ENST00000537529 LINC00114Q6XXX2 140 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 RTL4Q6ZR62 310 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 SIX5Q8N196 739 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 FAM83FQ8NEG4 500 aaPredicted RBP14.42□□□□□ -0.1
MKS1-204ENST00000537529 SPRYD4Q8WW59 207 aaPredicted RBP14.42□□□□□ -0.1
MKS1-204ENST00000537529 OIT3Q8WWZ8 545 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 OR1F2PQ96R84 312 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 YIPF2Q9BWQ6 316 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 RERGLQ9H628 205 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 MKKSQ9NPJ1 570 aaPredicted RBP14.42□□□□□ -0.1
MKS1-204ENST00000537529 LANCL2Q9NS86 450 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 DYRK3O43781 588 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 DUX1O43812 170 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 PPP1R3DO95685 299 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 HK1P19367 917 aa14.42□□□□□ -0.1
MKS1-204ENST00000537529 GTF2E2P29084 291 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms