RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 MAT1AQ00266 395 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 OXA1LQ15070 435 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CT45A2Q5DJT8 189 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 PRPF38BQ5VTL8 546 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 ARHGAP11AQ6P4F7 1023 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 WDR74Q6RFH5 385 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 LINC00114Q6XXX2 140 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 MEPCEQ7L2J0 689 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 ZBTB46Q86UZ6 589 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 C11orf74Q86VG3 221 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 NDC1Q9BTX1 674 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 RBCK1Q9BYM8 510 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 TPK1Q9H3S4 243 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 SYNDIG1Q9H7V2 258 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 DAPK2Q9UIK4 370 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 GPR52Q9Y2T5 361 aa12.53□□□□□ -0.4
SMG6-203ENST00000536871 CAB39Q9Y376 341 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 SPIN1Q9Y657 262 aaPredicted RBP12.53□□□□□ -0.4
SMG6-203ENST00000536871 SCN3AQ9NY46 2000 aa12.52□□□□□ -0.4
SMG6-203ENST00000536871 CDH23Q9H251 3354 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 NPIPA5A0A0B4J1W7 369 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 IQCMA0A1B0GVH7 501 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 NPIPA7E9PJI5 369 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 PTP4A3O75365 173 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 CSTAP01040 98 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 CTSBP07858 339 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 NPIPA8P0DM63 369 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 PNMTP11086 282 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 PNLIPP16233 465 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 ZNF3P17036 446 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 HK1P19367 917 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 CD53P19397 219 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 MAKP20794 623 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 TBXA2RP21731 343 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 HOXA6P31267 233 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.41
SMG6-203ENST00000536871 SOX3P41225 446 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 CSNK1EP49674 416 aaKnown RBP12.52□□□□□ -0.41
SMG6-203ENST00000536871 BTG2P78543 158 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 NPSR1Q6W5P4 371 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 HSDL2Q6YN16 418 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 AP3S1Q92572 193 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 SLC41A2Q96JW4 573 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 CEP19Q96LK0 163 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 KCTD7Q96MP8 289 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 PTCHD1Q96NR3 888 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 DUSP23Q9BVJ7 150 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 SPRTNQ9H040 489 aaPredicted RBP12.52□□□□□ -0.41
SMG6-203ENST00000536871 LANCL2Q9NS86 450 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 NINQ8N4C6 2090 aa12.52□□□□□ -0.41
SMG6-203ENST00000536871 FRG2CA6NGY1 282 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 PRR23D1E9PI22 279 aaPredicted RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 UPK1BO75841 260 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 HLA-DPB1P04440 258 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 PRR23D2P0DMB1 279 aaPredicted RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 PEPDP12955 493 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 HPGDP15428 266 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 MAOAP21397 527 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 RFX3P48380 749 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 PGDP52209 483 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ACTC1P68032 377 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ACTA1P68133 377 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ELAVL1Q15717 326 aaKnown RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 ISXQ2M1V0 245 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 LIPKQ5VXJ0 399 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 WDR88Q6ZMY6 472 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 OAFQ86UD1 273 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CPOQ8IVL8 374 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ACBD7Q8N6N7 88 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 PFN4Q8NHR9 129 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 DOK4Q8TEW6 326 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 IFT27Q9BW83 186 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 SP140LQ9H930 580 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CAPN10Q9HC96 672 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 MOV10Q9HCE1 1003 aaKnown RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 HINT3Q9NQE9 182 aaKnown RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 ASB6Q9NWX5 421 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 KLHL21Q9UJP4 597 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ICAM5Q9UMF0 924 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 BRWD1Q9NSI6 2320 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 A0A087WUJ7 227 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 TRDV1A0A1B0GX56 115 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 H3BMH7 237 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CDC123O75794 336 aaPredicted RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 IL33O95760 270 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CH25HO95992 272 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 IGKV1D-16P01601 117 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms