RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CPOXP36551 454 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
PRKDC-207ENST00000536483 IRX1P78414 480 aaPredicted RBP11.16□□□□□ -0.62
PRKDC-207ENST00000536483 FAM27E3Q08E93 113 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 FGFBP1Q14512 234 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 Q5PR19 223 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 CBLN3Q6UW01 205 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 ESPNLQ6ZVH7 1005 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 ANKRD46Q86W74 232 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 P3H2Q8IVL5 708 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 CIARTQ8N365 385 aaPredicted RBP11.16□□□□□ -0.62
PRKDC-207ENST00000536483 TRIML2Q8N7C3 387 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 FAM71CQ8NEG0 241 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 GPR119Q8TDV5 335 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 OR52B2Q96RD2 323 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 OR52E6Q96RD3 313 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 KLHDC3Q9BQ90 382 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 LAT2Q9GZY6 243 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 MARCOQ9UEW3 520 aaPredicted RBP11.16□□□□□ -0.62
PRKDC-207ENST00000536483 LIPT1Q9Y234 373 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 TESMINQ9Y4I5 508 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 GPC6Q9Y625 555 aaPredicted RBP11.16□□□□□ -0.62
PRKDC-207ENST00000536483 USH1CQ9Y6N9 552 aa11.16□□□□□ -0.62
PRKDC-207ENST00000536483 PCNX3Q9H6A9 2034 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 PRAMEF27A3QJZ7 478 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 SERINC4A6NH21 518 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 H0YC42 278 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 HMGN4O00479 90 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 MSTNO14793 375 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 UBDO15205 165 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 SIAH2O43255 324 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 ARHGEF9O43307 516 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 KIAA0513O60268 411 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 SMPD2O60906 423 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 SMNDC1O75940 238 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 CPSF4O95639 269 aaKnown RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 CGAP01215 116 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 KITP10721 976 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 SOAT1P35610 550 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 ZNF41P51814 821 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 MVDP53602 400 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 TPD52P55327 224 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 RPS26P62854 115 aaKnown RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 GNGT1P63211 74 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 FUT5Q11128 374 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 TYW3Q6IPR3 259 aaKnown RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 CHMP1BQ7LBR1 199 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 P4HA3Q7Z4N8 544 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 CLEC4FQ8N1N0 589 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 OR5M1Q8NGP8 315 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 OR5W2Q8NH69 310 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 PHOSPHO1Q8TCT1 267 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 FIG4Q92562 907 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 STARD4Q96DR4 205 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 CHMP6Q96FZ7 201 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 MRGPRX4Q96LA9 322 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 WFIKKN1Q96NZ8 548 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 TRNT1Q96Q11 434 aaKnown RBP11.15□□□□□ -0.62
PRKDC-207ENST00000536483 PANX1Q96RD7 426 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 ZBTB18Q99592 522 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 NPAS1Q99742 590 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 SLC35A5Q9BS91 424 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 CCDC28BQ9BUN5 200 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 KLHL28Q9NXS3 571 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 VDAC3Q9Y277 283 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 GMEB1Q9Y692 573 aa11.15□□□□□ -0.62
PRKDC-207ENST00000536483 FAM171A2A8MVW0 826 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 H3BML4 177 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 H7C1Q1 480 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF264O43296 627 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 OIP5O43482 229 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 EFNA2O43921 213 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 OR12D1P0DN82 309 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 CD8BP10966 210 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 FCGR2AP12318 317 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 PRKCAP17252 672 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 LSP1P33241 339 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 KHKP50053 298 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 SKP2Q13309 424 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 PDZK1Q5T2W1 519 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 FRRS1Q6ZNA5 592 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 CNEP1R1Q8N9A8 125 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 GATSQ8NAP1 163 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 LRRC8CQ8TDW0 803 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 ZFP90Q8TF47 636 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 XAGE5Q8WWM1 108 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 PIGTQ969N2 578 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 ROPN1LQ96C74 230 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 PIK3IP1Q96FE7 263 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 SH3YL1Q96HL8 342 aaPredicted RBP11.14□□□□□ -0.63
PRKDC-207ENST00000536483 COX4I2Q96KJ9 171 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 RNF145Q96MT1 663 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 PIP5K1AQ99755 562 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 INPP5KQ9BT40 448 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 SLCO1B3Q9NPD5 702 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms