RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 OR2A2Q6IF42 318 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 SLC2A7Q6PXP3 512 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF474Q6S9Z5 364 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-206ENST00000536398 TMEM200AQ86VY9 491 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 FUNDC1Q8IVP5 155 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF619Q8N2I2 560 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 TRIML2Q8N7C3 387 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 OSTF1Q92882 214 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 LRRC46Q96FV0 321 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 AURKBQ96GD4 344 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-206ENST00000536398 SRXN1Q9BYN0 137 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 SLC38A1Q9H2H9 487 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 ACBD3Q9H3P7 528 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 PIGMQ9H3S5 423 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 TCF7L2Q9NQB0 619 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF446Q9NWS9 450 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 FOXD3Q9UJU5 478 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-206ENST00000536398 TUBAL3A6NHL2 446 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 POLR3GO15318 223 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-206ENST00000536398 DNAJA2O60884 412 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 ADAM11O75078 769 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 CTAG2O75638 210 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 CGAP01215 116 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 CRHP06850 196 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 GUSBP08236 651 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 ETFAP13804 333 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 ME2P23368 584 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 CARD18P57730 90 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 CBFBQ13951 182 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 ESPNLQ6ZVH7 1005 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 EIF3MQ7L2H7 374 aaKnown RBP12.78□□□□□ -0.36
UBE3B-206ENST00000536398 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 ROBO4Q8WZ75 1007 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 ITCHQ96J02 903 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 KLHL15Q96M94 604 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 PRRG4Q9BZD6 226 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 POLE3Q9NRF9 147 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 STOML1Q9UBI4 398 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 GPC6Q9Y625 555 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-206ENST00000536398 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
UBE3B-206ENST00000536398 A0A1W2PNR3 127 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 MSTNO14793 375 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 ANP32DO95626 131 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 KRT75O95678 551 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 NR2F1P10589 423 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 NID1P14543 1247 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 ADH6P28332 368 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 RYKP34925 604 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 CPOXP36551 454 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 SESN3P58005 492 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 KCNJ10P78508 379 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 LRRC74AQ0VAA2 488 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 SLC25A53Q5H9E4 307 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 C6orf10Q5SRN2 563 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 KIF18BQ86Y91 864 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF610Q8N9Z0 462 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 FAM71CQ8NEG0 241 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 FAM222BQ8WU58 562 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 CNOT9Q92600 299 aaKnown RBP12.77□□□□□ -0.37
UBE3B-206ENST00000536398 GTF2H4Q92759 462 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 MRGPRX4Q96LA9 322 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 MAGEB18Q96M61 343 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 TRNT1Q96Q11 434 aaKnown RBP12.77□□□□□ -0.37
UBE3B-206ENST00000536398 GPATCH1Q9BRR8 931 aaKnown RBP12.77□□□□□ -0.37
UBE3B-206ENST00000536398 PAIP1Q9H074 479 aaKnown RBP12.77□□□□□ -0.37
UBE3B-206ENST00000536398 RMND5AQ9H871 391 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 TPT1P8Q9HAU6 139 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 SLC24A3Q9HC58 644 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 SLC52A3Q9NQ40 469 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 SLAMF8Q9P0V8 285 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 MPDZO75970 2070 aa12.77□□□□□ -0.37
UBE3B-206ENST00000536398 IGHV3-15A0A0B4J1V0 119 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 FAM221AA4D161 298 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 A6NNC1 897 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 ETV2O00321 342 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-206ENST00000536398 AP3D1O14617 1153 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 SYNGR4O95473 234 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 NUDT7P0C024 238 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 ZCCHC18P0CG32 403 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 EPXP11678 715 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 KLK2P20151 261 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 CAPN3P20807 821 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 ELK4P28324 431 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 CRATP43155 626 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
UBE3B-206ENST00000536398 EEF1A1P68104 462 aaKnown RBP12.76□□□□□ -0.37
UBE3B-206ENST00000536398 HPCAP84074 193 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 SORDQ00796 357 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 EEF1A1P5Q5VTE0 462 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 BLOC1S3Q6QNY0 202 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 LRRC74BQ6ZQY2 392 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 MSANTD1Q6ZTZ1 278 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 FAM214BQ7L5A3 538 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 LIME1Q9H400 295 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms