RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 TRAF4Q9BUZ4 470 aaPredicted RBP17.31■□□□□ 0.36
CHPF-203ENST00000535926 CLEC4AQ9UMR7 237 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 DAPP1Q9UN19 280 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 KIAA0100Q14667 2235 aaKnown RBP17.31■□□□□ 0.36
CHPF-203ENST00000535926 SLC31A1O15431 190 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 NID1P14543 1247 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 RBMS1P29558 406 aaKnown RBP17.31■□□□□ 0.36
CHPF-203ENST00000535926 ACSL1P33121 698 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 HCCSP53701 268 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 BTG1P62324 171 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 GARNL3Q5VVW2 1013 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 USP53Q70EK8 1073 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 PXKQ7Z7A4 578 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 RFLNBQ8N5W9 214 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 OR5H6Q8NGV6 325 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 OR5J2Q8NH18 312 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 KCTD12Q96CX2 325 aaKnown RBP17.31■□□□□ 0.36
CHPF-203ENST00000535926 OR2A5Q96R48 311 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 PLA2G2FQ9BZM2 168 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 ERVMER34-1Q9H9K5 563 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 FOLH1BQ9HBA9 442 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 ZNF624Q9P2J8 865 aaPredicted RBP17.31■□□□□ 0.36
CHPF-203ENST00000535926 SLC23A1Q9UHI7 598 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 C19orf53Q9UNZ5 99 aaPredicted RBP17.31■□□□□ 0.36
CHPF-203ENST00000535926 NCKAP1Q9Y2A7 1128 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 CACNG2Q9Y698 323 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 COLEC10Q9Y6Z7 277 aa17.31■□□□□ 0.36
CHPF-203ENST00000535926 ATG2BQ96BY7 2078 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 A0A1W2PPK0 400 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 MAGEB4O15481 346 aaPredicted RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 FZD7O75084 574 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 STX11O75558 287 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SOX30O94993 753 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 ADH1BP00325 375 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SAGP10523 405 aaPredicted RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 SHC2P98077 582 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 MRPL28Q13084 256 aaKnown RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 CRMP1Q14194 572 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 TMPRSS11FQ6ZWK6 438 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 CCL4L1Q8NHW4 92 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 FLVCR1-AS1Q8TAF5 88 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 NT5CQ8TCD5 201 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 TM4SF19Q96DZ7 209 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 PEX11GQ96HA9 241 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 TTTY10Q9BZA0 68 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 KLHL1Q9NR64 748 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 USP36Q9P275 1121 aaKnown RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 SCN2AQ99250 2005 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 A0A0B4J203 849 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 FAM86C2PA6NEL3 165 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SLC22A31A6NKX4 558 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 PTP4A3O75365 173 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 DBIP07108 87 aaKnown RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 POU2F2P09086 479 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 LAMP2P13473 410 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SDHBP21912 280 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SLC2A5P22732 501 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 NTRK2Q16620 822 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 ACSM3Q53FZ2 586 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 CREB3L2Q70SY1 520 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 PRSS41Q7RTY9 318 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 C9orf62Q8N4C0 152 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 TMEM52Q8NDY8 209 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SMPDL3BQ92485 455 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 SMAD5Q99717 465 aaKnown RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 NUDT15Q9NV35 164 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 PHF11Q9UIL8 331 aa17.3■□□□□ 0.36
CHPF-203ENST00000535926 MRPS2Q9Y399 296 aaKnown RBP17.3■□□□□ 0.36
CHPF-203ENST00000535926 LOC105369274A0A096LPK9 316 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 KCNJ13O60928 360 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 RCBTB2O95199 551 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 SLC35G6P0C7Q6 338 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 TMEM240Q5SV17 173 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 ZAR1Q86SH2 424 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 OR4N4Q8N0Y3 316 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 OR4D9Q8NGE8 314 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 GHSRQ92847 366 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 BADQ92934 168 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 SLC22A7Q9Y694 548 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 POM121BA6NF01 834 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 LRRC72A6NJI9 287 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 PYCR1P32322 319 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 SEC13P55735 322 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 ENPP2Q13822 863 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 RNASE12Q5GAN4 147 aaKnown RBP17.29■□□□□ 0.36
CHPF-203ENST00000535926 BICRALQ6AI39 1079 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 TPRA1Q86W33 373 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 GHDCQ8N2G8 530 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 C7orf57Q8NEG2 295 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 OR11H7Q8NGC8 314 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 GRHL3Q8TE85 626 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 SERINC2Q96SA4 455 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 GHITMQ9H3K2 345 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 CCDC86Q9H6F5 360 aaKnown RBP17.29■□□□□ 0.36
CHPF-203ENST00000535926 SLC35A3Q9Y2D2 325 aa17.29■□□□□ 0.36
CHPF-203ENST00000535926 PPP1R3DO95685 299 aa17.28■□□□□ 0.36
CHPF-203ENST00000535926 CD3GP09693 182 aa17.28■□□□□ 0.36
CHPF-203ENST00000535926 BMP8BP34820 402 aa17.28■□□□□ 0.36
CHPF-203ENST00000535926 SUZ12Q15022 739 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms