RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SCPEP1Q9HB40 452 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SLC6A13Q9NSD5 602 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ACER3Q9NUN7 267 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SDHAF2Q9NX18 166 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 MED11Q9P086 117 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 HCN3Q9P1Z3 774 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 EXTL2Q9UBQ6 330 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CRLS1Q9UJA2 301 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SPATA2Q9UM82 520 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 LIPT1Q9Y234 373 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 DLGAP4Q9Y2H0 992 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 RAI2Q9Y5P3 530 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 DSPPQ9NZW4 1301 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TRANK1O15050 2925 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CHD7Q9P2D1 2997 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 GREB1Q4ZG55 1949 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 LOC102723532A0A0G2JNH3 316 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 TRBC2A0A5B9 178 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ARHGEF33A8MVX0 844 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 PRSS44E7EML9 344 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 F8W810 466 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ABCD4O14678 606 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 PGRMC2O15173 223 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 OR10H3O60404 316 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 OR1I1O60431 355 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 CLDN11O75508 207 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 RP2O75695 350 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SC5DO75845 299 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 APOC1P02654 83 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 TCRBP04435 133 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 H1F0P07305 194 aaKnown RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 FHP07954 510 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ANXA4P09525 319 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 PIRTP0C851 137 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SULT1A3P0DMM9 295 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SULT1A4P0DMN0 295 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 MAPK3P27361 379 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 TRIM23P36406 574 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 BDKRB1P46663 353 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 TGM4P49221 684 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 CLCNKAP51800 687 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 CRISP3P54108 245 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 RPS7P62081 194 aaKnown RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 IRF8Q02556 426 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 PUDPQ08623 228 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 CNTN1Q12860 1018 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 GPR17Q13304 367 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ZNF177Q13360 481 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 DYRK1AQ13627 763 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 GNA13Q14344 377 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 GPR176Q14439 515 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ZNF273Q14593 569 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SHHQ15465 462 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 PLA1AQ53H76 456 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 C9orf50Q5SZB4 431 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 MPP7Q5T2T1 576 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 GPRC6AQ5T6X5 926 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 HBMQ6B0K9 141 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ADNP2Q6IQ32 1131 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 KIAA1161Q6NSJ0 714 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 REEP3Q6NUK4 255 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 RETSATQ6NUM9 610 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 FBXL22Q6P050 247 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 WASH2PQ6VEQ5 465 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 TFAP2EQ6VUC0 442 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 Q6ZSN1 163 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 HTR3DQ70Z44 454 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 BTN2A1Q7KYR7 527 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 HSD17B13Q7Z5P4 300 aaPredicted RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 SERPINA9Q86WD7 417 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 MARCH9Q86YJ5 346 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 C1orf210Q8IVY1 113 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 PDZD9Q8IXQ8 264 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ZNF683Q8IZ20 524 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 EIF4E3Q8N5X7 224 aaKnown RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 CELF5Q8N6W0 485 aaKnown RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 TCEANCQ8N8B7 351 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 ZBTB44Q8NCP5 570 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 OR52I1Q8NGK6 324 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 OR2T4Q8NH00 348 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 OR52N1Q8NH53 320 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 CDC26Q8NHZ8 85 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 TEX47Q8TBZ9 253 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SCARB1Q8WTV0 552 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 TM9SF4Q92544 642 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SLC9A6Q92581 669 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 MARS2Q96GW9 593 aaKnown RBP6.12□□□□□ -1.43
USP28-202ENST00000535607 CAMK1GQ96NX5 476 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 TRIB1Q96RU8 372 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SLC35A5Q9BS91 424 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 VN1R3Q9BXE9 311 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 SHARPINQ9H0F6 387 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 LMAN2LQ9H0V9 348 aa6.12□□□□□ -1.43
USP28-202ENST00000535607 CHST8Q9H2A9 424 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms