RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF385BQ569K4 471 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 SLCO4C1Q6ZQN7 724 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 BCDIN3DQ7Z5W3 292 aaKnown RBP8.43□□□□□ -1.06
SF3B2-216ENST00000534765 SERPINA12Q8IW75 414 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 LGI4Q8N135 537 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 DPP10Q8N608 796 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 OR10H5Q8NGA6 315 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 HHIPQ96QV1 700 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 NELL2Q99435 816 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 TEX10Q9NXF1 929 aaPredicted RBP8.43□□□□□ -1.06
SF3B2-216ENST00000534765 POFUT2Q9Y2G5 429 aa8.43□□□□□ -1.06
SF3B2-216ENST00000534765 A0A075B6Q4 140 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 URADA6NGE7 173 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 D6RAR5 112 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SULT1C2O00338 296 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TCAPO15273 167 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 UGT2B7P16662 529 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 NDUFB7P17568 137 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 NTSR1P30989 418 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 KEAP1Q14145 624 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 PDZD11Q5EBL8 140 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 PTRH1Q86Y79 214 aaKnown RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TSACCQ96A04 125 aaPredicted RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SORCS2Q96PQ0 1159 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 C1QTNF2Q9BXJ5 285 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 LHX9Q9NQ69 397 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 COA4Q9NYJ1 87 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 STUB1Q9UNE7 303 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SNX11Q9Y5W9 270 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 CD8B2A6NJW9 211 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 RFXANKO14593 260 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 EIF1BO60739 113 aaKnown RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SCN2BO60939 215 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 C8GP07360 202 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 UCHL1P09936 223 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 CD8BP10966 210 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 AMD1P17707 334 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 ETV6P41212 452 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 EIF1P41567 113 aaKnown RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 ADAMTSL4Q6UY14 1074 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 CLECL1Q8IZS7 167 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SLC5A8Q8N695 610 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 AVL9Q8NBF6 648 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 HUS1BQ8NHY5 278 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TMEM159Q96B96 161 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 APOLD1Q96LR9 279 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 ANKRD19PQ9H560 264 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 C6orf106Q9H6K1 298 aaPredicted RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SPTBP11277 2137 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 LOC100509620A0A075B734 347 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 DNASE2O00115 360 aaPredicted RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 RTCAO00442 366 aaKnown RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 DNAJB6O75190 326 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 CTSBP07858 339 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 MELKQ14680 651 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SYTL3Q4VX76 610 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 XKR6Q5GH73 641 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 METRNLQ641Q3 311 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TFAP2EQ6VUC0 442 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF852Q6ZMS4 543 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TIPARPQ7Z3E1 657 aaKnown RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TMPRSS11BQ86T26 416 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 ADGRF3Q8IZF5 1079 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 KCT2Q8NC54 265 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 OR9Q2Q8NGE9 314 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 NELL1Q92832 810 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 CREB3L1Q96BA8 519 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 LINC00615Q96LM1 132 aaPredicted RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
SF3B2-216ENST00000534765 SLC17A9Q9BYT1 436 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D29Q9UFV1 150 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 TRAPPC4Q9Y296 219 aa8.42□□□□□ -1.06
SF3B2-216ENST00000534765 PRKRAO75569 313 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HIST1H2AGP0C0S8 130 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HIST1H2ADP20671 130 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 CRYBA2P53672 197 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SLC16A1P53985 500 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PPP3R1P63098 170 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.066e-13■■■□□ 16.3
SF3B2-216ENST00000534765 EIF2S3LQ2VIR3 472 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 CCNJQ5T5M9 372 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ZDHHC20Q5W0Z9 365 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HIST2H2AA3Q6FI13 130 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 CLEC9AQ6UXN8 241 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 C9orf43Q8TAL5 461 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SELENOMQ8WWX9 145 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 OR1E3Q8WZA6 343 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HIST1H2AHQ96KK5 128 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HIST1H2AJQ99878 128 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 THAP7Q9BT49 309 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 H2AFJQ9BTM1 129 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TMEM185BQ9H7F4 350 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 EMC7Q9NPA0 242 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TVP23BQ9NYZ1 205 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 NLGN3Q9NZ94 848 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SCP2D1Q9UJQ7 156 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 CEP192Q8TEP8 1941 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3DA0A087WVF3 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3IA0A087WXS9 549 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms