RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NME5P56597 212 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 PLAURQ03405 335 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 GPR68Q15743 365 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 MAPK14Q16539 360 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 ZNF239Q16600 458 aaKnown RBP12.57□□□□□ -0.4
SF3B2-215ENST00000534307 TYW3Q6IPR3 259 aaKnown RBP12.57□□□□□ -0.4
SF3B2-215ENST00000534307 TNFAIP8L2Q6P589 184 aaPredicted RBP12.57□□□□□ -0.4
SF3B2-215ENST00000534307 PAMR1Q6UXH9 720 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 FAM71CQ8NEG0 241 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 TOR1AIP2Q8NFQ8 470 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 OIT3Q8WWZ8 545 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 OSTF1Q92882 214 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 RAB8BQ92930 207 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 MRGPRX4Q96LA9 322 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 MANSC1Q9H8J5 431 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 COQ10BQ9H8M1 238 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 CCM2LQ9NUG4 571 aaPredicted RBP12.57□□□□□ -0.4
SF3B2-215ENST00000534307 EXD2Q9NVH0 621 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 MKLN1Q9UL63 735 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
SF3B2-215ENST00000534307 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
SF3B2-215ENST00000534307 ZANQ9Y493 2812 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 GOLGA8QA0A0J9YX86 632 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 GOLGA8OA6NCC3 632 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 TRPC5OSA6NMA1 111 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 DEFB108AA8MXU0 73 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 GOLGA8NF8WBI6 632 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 SLCO1B7G3V0H7 640 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 KLF11O14901 512 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 BCAS1O75363 584 aaPredicted RBP12.56□□□□□ -0.4
SF3B2-215ENST00000534307 CPSF4O95639 269 aaKnown RBP12.56□□□□□ -0.4
SF3B2-215ENST00000534307 NUDT14O95848 222 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 AGR2O95994 175 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 PGRP06401 933 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 POU2F1P14859 743 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 KLK2P20151 261 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 SFTPDP35247 375 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 CDKN2CP42773 168 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 CARD18P57730 90 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 QPRTQ15274 297 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 ATG16L1Q676U5 607 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 FRRS1Q6ZNA5 592 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 C22orf34Q6ZV56 151 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 C16orf62Q7Z3J2 963 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 ZNF614Q8N883 585 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 ROPN1LQ96C74 230 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 MBD6Q96DN6 1003 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 MARK4Q96L34 752 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 SLC39A3Q9BRY0 314 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 SLC35A5Q9BS91 424 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 INPP5KQ9BT40 448 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 SRXN1Q9BYN0 137 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 LAT2Q9GZY6 243 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 DLL4Q9NR61 685 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 KLHL28Q9NXS3 571 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 NKIRAS1Q9NYS0 192 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 PROCRQ9UNN8 238 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 PLEKHA6Q9Y2H5 1048 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 EMC9Q9Y3B6 208 aa12.56□□□□□ -0.4
SF3B2-215ENST00000534307 ATRQ13535 2644 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 C16orf97H3BN30 126 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 HMGN4O00479 90 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 ATE1O95260 518 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 SYNGR4O95473 234 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 KITP10721 976 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 AGTR1P30556 359 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 PGM1P36871 562 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 KHKP50053 298 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 SELENBP1Q13228 472 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 CBFBQ13951 182 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 PDCD4Q53EL6 469 aaKnown RBP12.55□□□□□ -0.4
SF3B2-215ENST00000534307 PDSS1Q5T2R2 415 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 ATAD3BQ5T9A4 648 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 XAGE5Q8WWM1 108 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 CPNE4Q96A23 557 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-215ENST00000534307 ZG16BQ96DA0 208 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 OR52E6Q96RD3 313 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 WDR45Q9Y484 360 aa12.55□□□□□ -0.4
SF3B2-215ENST00000534307 FBN1P35555 2871 aaKnown RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 CCDC154A6NI56 674 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 GJE1A6NN92 205 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 PLGP00747 810 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 CSTAP01040 98 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 RAF1P04049 648 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 UBTFL6P0CB48 400 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 IDO1P14902 403 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 CRYGSP22914 178 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 CHI3L1P36222 383 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 CTBP2P56545 445 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 LRRC74AQ0VAA2 488 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 FOXD4Q12950 439 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms