RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SLC6A17Q9H1V8 727 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 ISYNA1Q9NPH2 558 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 BABAM2Q9NXR7 383 aa17.97■□□□□ 0.47
CAPN1-226ENST00000533820 RGS9O75916 674 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-226ENST00000533820 MAKP20794 623 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 FRRS1Q6ZNA5 592 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 MBOAT2Q6ZWT7 520 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 OR2L3Q8NG85 312 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 OR51L1Q8NGJ5 315 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 ABHD1Q96SE0 405 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 PRKAG2Q9UGJ0 569 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 ADAM30Q9UKF2 790 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 CES1P1Q9UKY3 287 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 SLC27A6Q9Y2P4 619 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 TP53BP1Q12888 1972 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-226ENST00000533820 TRAV27A0A087WT01 109 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 HLA-DQB1P01920 261 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 DRD3P35462 400 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 TRA2BP62995 288 aaKnown RBP17.96■□□□□ 0.47
CAPN1-226ENST00000533820 MAPK14Q16539 360 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF836Q6ZNA1 936 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 RFT1Q96AA3 541 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 KCNJ15Q99712 375 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 IFT27Q9BW83 186 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 ACTRT3Q9BYD9 372 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 CCDC86Q9H6F5 360 aaKnown RBP17.96■□□□□ 0.47
CAPN1-226ENST00000533820 TMEM74BQ9NUR3 256 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF443Q9Y2A4 671 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-226ENST00000533820 HRH3Q9Y5N1 445 aa17.96■□□□□ 0.47
CAPN1-226ENST00000533820 SAGP10523 405 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 TEAD1P28347 426 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 DUSP5Q16690 384 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 DEFB134Q4QY38 66 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 TMEM35AQ53FP2 167 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 THSD4Q6ZMP0 1018 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 OR13C2Q8NGS9 318 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 OR5W2Q8NH69 310 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 SYT5O00445 386 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 GNB5O14775 395 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 NDUFS6O75380 124 aaKnown RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 SLC43A1O75387 559 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF888P0CJ79 500 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 PEBP1P30086 187 aaKnown RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 FGL2Q14314 439 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 DECR1Q16698 335 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 MRM1Q6IN84 353 aaKnown RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 ANKRD54Q6NXT1 300 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 TRILQ7L0X0 811 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 GRHL3Q8TE85 626 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 MED28Q9H204 178 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 NT5DC2Q9H857 520 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 USP36Q9P275 1121 aaKnown RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 NCKAP1Q9Y2A7 1128 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 PEX12O00623 359 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 IGHA1P01876 353 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 OR12D2P58182 307 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 ZIC1Q15915 447 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 TRMT12Q53H54 448 aaKnown RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 FAM78AQ5JUQ0 283 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 ZBTB37Q5TC79 503 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 PSRC1Q6PGN9 363 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-226ENST00000533820 FIGNL1Q6PIW4 674 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 IZUMO1Q8IYV9 350 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 HDDC3Q8N4P3 179 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 OR6C4Q8NGE1 309 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 OR52N1Q8NH53 320 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 SFXN5Q8TD22 340 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 CHFRQ96EP1 664 aa17.95■□□□□ 0.46
CAPN1-226ENST00000533820 FGF19O95750 216 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 TPMTP51580 245 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 FXYD6P3P58550 94 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 RGS1Q08116 209 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 NTRK2Q16620 822 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 GAB4Q2WGN9 574 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 CORO6Q6QEF8 472 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 ZC3HAV1LQ96H79 300 aaKnown RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF681Q96N22 645 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 TIMP4Q99727 224 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 CDCP1Q9H5V8 836 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 CACYBPQ9HB71 228 aaKnown RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 NKIRAS2Q9NYR9 191 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 EXOGQ9Y2C4 368 aaKnown RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 ARID1BQ8NFD5 2236 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 CACNA1IQ9P0X4 2223 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 LINC00862A6NCI5 91 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 SLC9B1P1A6NJY1 282 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 BMP7P18075 431 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 PYCR1P32322 319 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 NIPAL3Q6P499 406 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 ZC3H14Q6PJT7 736 aaKnown RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 C4orf36Q96KX1 117 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 RSPH9Q9H1X1 276 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 SIDT1Q9NXL6 827 aaKnown RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 NLGN3Q9NZ94 848 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 MRPL15Q9P015 296 aaKnown RBP17.94■□□□□ 0.46
CAPN1-226ENST00000533820 ACSL5Q9ULC5 683 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 COPS3Q9UNS2 423 aa17.94■□□□□ 0.46
CAPN1-226ENST00000533820 UNC119BA6NIH7 251 aa17.93■□□□□ 0.46
CAPN1-226ENST00000533820 ATP12AP54707 1039 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms