RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 EFNA2O43921 213 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 EIF4E2O60573 245 aaKnown RBP9.34□□□□□ -0.91
CAPN1-225ENST00000533704 SCN2BO60939 215 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 CGAP01215 116 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 C1QCP02747 245 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 RAF1P04049 648 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 GSNP06396 782 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 PRKCAP17252 672 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ELK4P28324 431 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 SLC7A1P30825 629 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 CCKARP32238 428 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 RYKP34925 604 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 UGT2B10P36537 528 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 HPCAP84074 193 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 OCRLQ01968 901 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 CASP8Q14790 479 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ARHGAP11BQ3KRB8 267 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 SAXO2Q658L1 398 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 OGFOD2Q6N063 350 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ALKBH2Q6NS38 261 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 DNAJC14Q6Y2X3 702 aaPredicted RBP9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF621Q6ZSS3 439 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 SPATA19Q7Z5L4 167 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 RNF130Q86XS8 419 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 CHDHQ8NE62 594 aaPredicted RBP9.34□□□□□ -0.91
CAPN1-225ENST00000533704 PNPT1Q8TCS8 783 aaKnown RBP9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ABHD3Q8WU67 409 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ROPN1LQ96C74 230 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 PIK3IP1Q96FE7 263 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 OR52E6Q96RD3 313 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 PANX1Q96RD7 426 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 FOXC2Q99958 501 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 INPP5KQ9BT40 448 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 THUMPD3Q9BV44 507 aaKnown RBP9.34□□□□□ -0.91
CAPN1-225ENST00000533704 SRXN1Q9BYN0 137 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 NMUR2Q9GZQ4 415 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF350Q9GZX5 532 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 QRSL1Q9H0R6 528 aaKnown RBP9.34□□□□□ -0.91
CAPN1-225ENST00000533704 MANSC1Q9H8J5 431 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 TMBIM4Q9HC24 238 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 TIGARQ9NQ88 270 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF226Q9NYT6 803 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 KCNE5Q9UJ90 142 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 WDR45Q9Y484 360 aa9.34□□□□□ -0.91
CAPN1-225ENST00000533704 SETD2Q9BYW2 2564 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 FLNAP21333 2647 aaKnown RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 IGHV3-15A0A0B4J1V0 119 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 A0A1W2PNR3 127 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 KIAA0513O60268 411 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 SS18L1O75177 396 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 SNNO75324 88 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 UGT2B17O75795 530 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 GOSR1O95249 250 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 AGR2O95994 175 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 PABPC4LP0CB38 370 aaKnown RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 IL12AP29459 219 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 AGTR1P30556 359 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 PPP2R2AP63151 447 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 FUT5Q11128 374 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 MERTKQ12866 999 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 SELENBP1Q13228 472 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 SKP2Q13309 424 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 GUSBP1Q15486 140 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF141Q15928 474 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 MAPK14Q16539 360 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF239Q16600 458 aaKnown RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 TIGD2Q4W5G0 525 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 TMEM201Q5SNT2 666 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 BEND6Q5SZJ8 279 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 GTF2IRD2BQ6EKJ0 949 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 TYW3Q6IPR3 259 aaKnown RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 HEPHL1Q6MZM0 1159 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 EIF3MQ7L2H7 374 aaKnown RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 FCRLAQ7L513 359 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 GTF2IRD2Q86UP8 949 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 STK32CQ86UX6 486 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 LRRC34Q8IZ02 419 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF619Q8N2I2 560 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 TRIML2Q8N7C3 387 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF563Q8TA94 476 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 MIPOL1Q8TD10 442 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 ZFP90Q8TF47 636 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 CPNE4Q96A23 557 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-225ENST00000533704 ARL8AQ96BM9 186 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 NEURL3Q96EH8 262 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 MRGPRX4Q96LA9 322 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 CCDC115Q96NT0 180 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 OR5B2Q96R09 309 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 PLEKHF2Q9H8W4 249 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 UBTD1Q9HAC8 227 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 GLRX2Q9NS18 164 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 GPR45Q9Y5Y3 372 aa9.33□□□□□ -0.92
CAPN1-225ENST00000533704 A0A1W2PPR1 153 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 SLCO1B7G3V0H7 640 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 SIAH2O43255 324 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 DIAPH2O60879 1101 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 ATE1O95260 518 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 H6PDO95479 791 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 NTN1O95631 604 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms