RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ATP6V1C2Q8NEY4 427 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 NEIL3Q8TAT5 605 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 RLN3Q8WXF3 142 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 ORAI3Q9BRQ5 295 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 FN3KQ9H479 309 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 FOLH1BQ9HBA9 442 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 CMC2Q9NRP2 79 aa14.17□□□□□ -0.14
CACNA1E-208ENST00000533229 A0A0C4DFX4 3053 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 A0A1B0GWA3 101 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 FOXS1O43638 330 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 CCR5P51681 352 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 NKX2-5P52952 324 aaPredicted RBP14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 MAZP56270 477 aaKnown RBP14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 CTBP2P56545 445 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 GPR50Q13585 617 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 AGAP6Q5VW22 663 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 ZNF613Q6PF04 617 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 XKRXQ6PP77 449 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 C19orf47Q8N9M1 422 aaKnown RBP14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 SCAIQ8N9R8 606 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 PEX11GQ96HA9 241 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 SENP5Q96HI0 755 aaPredicted RBP14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 AGAP4Q96P64 663 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 TEAD3Q99594 435 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 ATF6BQ99941 703 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 LRRC61Q9BV99 259 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 ALG8Q9BVK2 526 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 MARCH7Q9H992 704 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 TMEM27Q9HBJ8 222 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 DNAJB12Q9NXW2 375 aaKnown RBP14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 CLDN16Q9Y5I7 305 aa14.16□□□□□ -0.14
CACNA1E-208ENST00000533229 CCDC182A6NF36 153 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 POLR1CO15160 346 aaPredicted RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 DYRK3O43781 588 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 TMCC2O75069 709 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 RCBTB2O95199 551 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 IGLV3-19P01714 112 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 OR2B6P58173 313 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 BTG2P78543 158 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 NPSR1Q6W5P4 371 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 NR2C2APQ86WQ0 139 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 CDK20Q8IZL9 346 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 CYB561A3Q8NBI2 242 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 CHAC2Q8WUX2 184 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 PMM1Q92871 262 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 RIT1Q92963 219 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 NECTIN4Q96NY8 510 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 TNFRSF13CQ96RJ3 184 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 ZNF559Q9BR84 538 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 LMF2Q9BU23 707 aaKnown RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 ZNF426Q9BUY5 554 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 OR51V1Q9H2C8 321 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 BABAM2Q9NXR7 383 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 WSB2Q9NYS7 404 aaPredicted RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 E9PI62 339 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 AGRPO00253 132 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 HRO43593 1189 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 CHP2O43745 196 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 HPGDSO60760 199 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 MRPL3P09001 348 aaKnown RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 IFI6P09912 130 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 APEX1P27695 318 aaKnown RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 HTR3AP46098 478 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 NNATQ16517 81 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 PRTGQ2VWP7 1150 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 ARMC6Q6NXE6 501 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 UBQLNLQ8IYU4 475 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 SLC7A5P1Q8MH63 180 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 Q8N9G6 341 aaPredicted RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 RCBTB1Q8NDN9 531 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 AP3S1Q92572 193 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 SPACA7Q96KW9 195 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 VSTM2LQ96N03 204 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 MAP3K3Q99759 626 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 RNF32Q9H0A6 362 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 PPIL3Q9H2H8 161 aaKnown RBP14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 POLE3Q9NRF9 147 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 ASB6Q9NWX5 421 aa14.15□□□□□ -0.14
CACNA1E-208ENST00000533229 GON4LQ3T8J9 2241 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 PRR23D1E9PI22 279 aaPredicted RBP14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 GTPBP1O00178 669 aaKnown RBP14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 RNF13O43567 381 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 PPP1R3DO95685 299 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 GYPBP06028 91 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 PRR23D2P0DMB1 279 aaPredicted RBP14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 SLC16A1P53985 500 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 CRMP1Q14194 572 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 GATAD2AQ86YP4 633 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 GRAMD2AQ8IUY3 354 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 UBE2J2Q8N2K1 259 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 OR10H4Q8NGA5 316 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 RBM18Q96H35 190 aaKnown RBP14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 COQ7Q99807 217 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 C11orf54Q9H0W9 315 aaPredicted RBP14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 MMP28Q9H239 520 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 A0A1W2PPC4 97 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 DAPL1A0PJW8 107 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 FAM86C2PA6NEL3 165 aa14.14□□□□□ -0.15
CACNA1E-208ENST00000533229 GNB5O14775 395 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms