RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CYS1Q717R9 158 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 TUBA1AQ71U36 451 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 COPS6Q7L5N1 327 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 APRG1Q8IVJ8 170 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 FAM9CQ8IZT9 166 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 FBXL14Q8N1E6 418 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 FGFRL1Q8N441 504 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 OR4F6Q8NGB9 312 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 OR4A4PQ8NGN8 299 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 CNIH3Q8TBE1 160 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 HCAR2Q8TDS4 363 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 TMED6Q8WW62 240 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 STMN2Q93045 179 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 CXorf40BQ96DE9 158 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 ASB9Q96DX5 294 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 C2orf48Q96LS8 159 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 ALKBH3Q96Q83 286 aaPredicted RBP3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 HOXD1Q9GZZ0 328 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 POPDC2Q9HBU9 364 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 TMEM165Q9HC07 324 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 CCNB1IP1Q9NPC3 277 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 DYRK4Q9NR20 520 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 PXMP2Q9NR77 195 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 INTS9Q9NV88 658 aaKnown RBP3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 QPCTLQ9NXS2 382 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 ADAM22Q9P0K1 906 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 IFNKQ9P0W0 207 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 STX18Q9P2W9 335 aaKnown RBP3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 CTSFQ9UBX1 484 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 KCNG2Q9UJ96 466 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 BARX2Q9UMQ3 279 aaPredicted RBP3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 TCF19Q9Y242 345 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 USP16Q9Y5T5 823 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 SAR1BQ9Y6B6 198 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 SNED1Q8TER0 1413 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 SH3TC1Q8TE82 1336 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 SALL1Q9NSC2 1324 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 CNTNAP2Q9UHC6 1331 aa3.7□□□□□ -1.82
AC055878.1-201ENST00000531858 TRBV9A0A0B4J1U6 114 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 MSGN1A6NI15 193 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SRRM3A6NNA2 597 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 NEDD8-MDP1E9PL57 170 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SIRPB1O00241 398 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF195O14628 629 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 CHST1O43916 411 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 EFNA2O43921 213 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 HUS1O60921 280 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 FZD7O75084 574 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 CA1P00915 261 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 OAS1P00973 400 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 TSHBP01222 138 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 CALCAP01258 141 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 GAPDHP04406 335 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 RPLP0P05388 317 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ALOX5P09917 674 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 PRSS56P0CW18 603 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 CCL2P13500 99 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 GATA1P15976 413 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 CALML3P27482 149 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 GCAP28676 217 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 PPP2R1BP30154 601 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 VHLP40337 213 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SOX3P41225 446 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 BRCC3P46736 316 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 GNPDA1P46926 289 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 DVL1P1P54792 670 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ERVK-16P61578 105 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 UBE2IP63279 158 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 IRF8Q02556 426 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF85Q03923 595 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 FASTKQ14296 549 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 NDUFA9Q16795 377 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 LGSNQ5TDP6 509 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 WSCD1Q658N2 575 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 C22orf42Q6IC83 251 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 OR8G2PQ6IF36 304 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 CAPRIN2Q6IMN6 1127 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 NEPROQ6NW34 567 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SASS6Q6UVJ0 657 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 TIPARPQ7Z3E1 657 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 HDDC2Q7Z4H3 204 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SNX20Q7Z614 316 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SPRED1Q7Z699 444 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 TMEM104Q8NE00 496 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SDR9C7Q8NEX9 313 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 B3GNT7Q8NFL0 401 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 OR9Q2Q8NGE9 314 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 OR4C3Q8NH37 302 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 OR6S1Q8NH40 331 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 RPLP0P6Q8NHW5 317 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF596Q8TC21 504 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 WBP1Q96G27 269 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 TIMD4Q96H15 378 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 KCNA7Q96RP8 456 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 FAM173AQ9BQD7 235 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 SCAND2PQ9GZW5 306 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 BICC1Q9H694 974 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF334Q9HCZ1 680 aaPredicted RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 ADAP2Q9NPF8 381 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms