RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PAGE2Q7Z2X7 111 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 LINC00523Q86TU6 105 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TAC4Q86UU9 113 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PAQR7Q86WK9 346 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 NELFCDQ8IXH7 590 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 MICU2Q8IYU8 434 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 GPC2Q8N158 579 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ANKRD13CQ8N6S4 541 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TCEANCQ8N8B7 351 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 RASGEF1AQ8N9B8 481 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TTC29Q8NA56 475 aaPredicted RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 OR2L3Q8NG85 312 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 OR9K2Q8NGE7 335 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 RPLP0P6Q8NHW5 317 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 NCOA7Q8NI08 942 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 OCC1Q8TAD7 63 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ADAMTS16Q8TE57 1224 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 DQX1Q8TE96 717 aaKnown RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SELENOMQ8WWX9 145 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 DNASE1L2Q92874 299 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ULK4Q96C45 1275 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SLC41A3Q96GZ6 507 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PLEKHA8Q96JA3 519 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SPATA13Q96N96 652 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF317Q96PQ6 595 aaPredicted RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TESK2Q96S53 571 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 DHRS9Q9BPW9 319 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 INPP5KQ9BT40 448 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 IDI2Q9BXS1 227 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 OSBPL8Q9BZF1 889 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SLC22A4Q9H015 551 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TPK1Q9H3S4 243 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 FZD8Q9H461 694 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 RANBP3Q9H6Z4 567 aaPredicted RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SMYD3Q9H7B4 428 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 Q9H8V8 135 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 MYNNQ9NPC7 610 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 IL1RAPQ9NPH3 570 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 NRBP2Q9NSY0 501 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM161AQ9NX61 479 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 EURLQ9NYK6 297 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ERGIC3Q9Y282 383 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 MAP3K15Q6ZN16 1313 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 KIF24Q5T7B8 1368 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 A0A1W2PPV4 95 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 WI2-2373I1.2A0A1W2PRP0 233 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FUOMA2VDF0 154 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 C5orf52A6NGY3 159 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 GABRR3A8MPY1 467 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 E7ENQ6 273 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CCL24O00175 119 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 TLR4O00206 839 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 HCN1O60741 890 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 PFDN1O60925 122 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 GMNNO75496 209 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ACSL3O95573 720 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 DHFRP00374 187 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 RLN1P04808 185 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 RPLP0P05388 317 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 PGK2P07205 417 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CSN3P07498 182 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FAM58BPP0C7Q3 252 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 OCMP0CE72 109 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 C8orf89P0DMQ9 161 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 EPCAMP16422 314 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CHI3L1P36222 383 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CDKN2CP42773 168 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 MAGEA2P43356 314 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 SLC26A2P50443 739 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CDK9P50750 372 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 BCAP31P51572 246 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 RIDAP52758 137 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 IST1P53990 364 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 C21orf59P57076 290 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 RPL10AP62906 217 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 TNNC1P63316 161 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 NAB1Q13506 487 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 VEZF1Q14119 521 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 MAPK11Q15759 364 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 MAPK6Q16659 721 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 GOLGA7BQ2TAP0 167 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 HIKESHIQ53FT3 197 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 IFI44LQ53G44 452 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 TEX44Q53QW1 395 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM41BQ5BJD5 291 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 XKR4Q5GH76 650 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 TEX30Q5JUR7 227 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CDKL4Q5MAI5 379 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 MARCH8Q5T0T0 291 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 NKAIN2Q5VXU1 208 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FAM91A1Q658Y4 838 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 SLC25A25Q6KCM7 469 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CCDC137Q6PK04 289 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 C1orf186Q6ZWK4 172 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 EIF3MQ7L2H7 374 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 NDUFAF7Q7L592 441 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 SNX20Q7Z614 316 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 YRDCQ86U90 279 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 LHFPL3Q86UP9 236 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CYP4Z1Q86W10 505 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms