RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	SMIM23	A6NLE4	172 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	NPIPB9	F8W1W9	429 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ETV2	O00321	342 aa	Predicted RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PIP5K1B	O14986	540 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	NPHS1	O60500	1241 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	EIF4E2	O60573	245 aa	Known RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	LYPLA1	O75608	230 aa	Predicted RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TP53	P04637	393 aa	Predicted RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	THBS1	P07996	1170 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	LAMP1	P11279	417 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ENPP1	P22413	925 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	OR3A2	P47893	321 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	BSPH1	Q075Z2	132 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TOMM34	Q15785	309 aa	Predicted RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	UGT3A2	Q3SY77	523 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	SPDYE7P	Q495Y7	208 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	C3orf33	Q6P1S2	294 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	SEZ6L2	Q6UXD5	910 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	GSPT2	Q8IYD1	628 aa	Known RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	C4orf33	Q8N1A6	199 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ZNF614	Q8N883	585 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ATP6V1C2	Q8NEY4	427 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	OR5W2	Q8NH69	310 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PRPF18	Q99633	342 aa	Known RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PSD2	Q9BQI7	771 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TRIM2	Q9C040	744 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	GRIP2	Q9C0E4	1043 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	SLCO5A1	Q9H2Y9	848 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ALG2	Q9H553	416 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CXorf36	Q9H7Y0	433 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	BARX1	Q9HBU1	254 aa	Predicted RBP	13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	FAIM	Q9NVQ4	179 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	GPATCH2	Q9NW75	528 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	MKS1	Q9NXB0	559 aa		13.82	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TLN2	Q9Y4G6	2542 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TMEM233	B4DJY2	109 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ZNF814	B7Z6K7	855 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ZNF264	O43296	627 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TLX2	O43763	284 aa	Predicted RBP	13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CHRNG	P07510	517 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	UBL4A	P11441	157 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CDKN1A	P38936	164 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CBFB	Q13951	182 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PPA1	Q15181	289 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PGGHG	Q32M88	737 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ATP6AP1L	Q52LC2	224 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	XKR7	Q5GH72	579 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	BHLHB9	Q6PI77	547 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TMCO5A	Q8N6Q1	288 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	MAPK1IP1L	Q8NDC0	245 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	KBTBD8	Q8NFY9	601 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	NEUROG1	Q92886	237 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	NMUR2	Q9GZQ4	415 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ING1	Q9UK53	422 aa	Predicted RBP	13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	KCNE3	Q9Y6H6	103 aa		13.81	□□□□□ -0.2
TM9SF1-209	ENST00000530468	IGHV3-15	A0A0B4J1V0	119 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468		A0A1W2PNR3	127 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	DPRX	A6NFQ7	191 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ZNF724	A8MTY0	619 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CYTIP	O60759	359 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PEX11A	O75192	247 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	C6orf47	O95873	294 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	AK1	P00568	194 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	IGHV4-39	P01824	125 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PRPS1L1	P21108	318 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ALDH3A1	P30838	453 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ACVR1B	P36896	505 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	RNF144A	P50876	292 aa	Predicted RBP	13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CCR4	P51679	360 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	RASGEF1B	Q0VAM2	473 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	FAP	Q12884	760 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PTGR1	Q14914	329 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	QPRT	Q15274	297 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	STK11	Q15831	433 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	NDUFAF6	Q330K2	333 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ARL13A	Q5H913	290 aa	Predicted RBP	13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	DTX2	Q86UW9	622 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	P2RY8	Q86VZ1	359 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	RFWD2	Q8NHY2	731 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	EPS8L3	Q8TE67	593 aa	Known RBP	13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ST8SIA1	Q92185	356 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	COQ8B	Q96D53	544 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	MUCL1	Q96DR8	90 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	APOPT1	Q96IL0	206 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	HS6ST2	Q96MM7	605 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	OR7D2	Q96RA2	312 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	ANKZF1	Q9H8Y5	726 aa		13.8	□□□□□ -0.2
TM9SF1-209	ENST00000530468	SERINC4	A6NH21	518 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	DUXA	A6NLW8	204 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	SMAD9	O15198	467 aa	Known RBP	13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	CD5L	O43866	347 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	LYZL6	O75951	148 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	COX5A	P20674	150 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	SERPINB5	P36952	375 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	NRF1	Q16656	503 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	TIMM23B	Q5SRD1	257 aa		13.79	□□□□□ -0.2
TM9SF1-209	ENST00000530468	PDZK1	Q5T2W1	519 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms