RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 DUS3LQ96G46 650 aaKnown RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 C5orf34Q96MH7 638 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 GNRHR2Q96P88 292 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 NPAS1Q99742 590 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 ARMC1Q9NVT9 282 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 RIMS3Q9UJD0 308 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 ICAM5Q9UMF0 924 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 A4GNTQ9UNA3 340 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 MAGED1Q9Y5V3 778 aaPredicted RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 SPTA1P02549 2419 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 CLOCKO15516 846 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 HNRNPRO43390 633 aaKnown RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 E2F6O75461 281 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 LDLRP01130 860 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 THY1P04216 161 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 CCNA2P20248 432 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 MST1P26927 711 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 OR1Q1Q15612 314 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 ATP6AP1Q15904 470 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 ZNF766Q5HY98 468 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 OR2T5Q6IEZ7 315 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 SLC30A6Q6NXT4 461 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 AAGABQ6PD74 315 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 TMEM179BQ7Z7N9 219 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 CYP4Z1Q86W10 505 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 PAPD5Q8NDF8 572 aaKnown RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 OR2T29Q8NH02 315 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 PRRC1Q96M27 445 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 BARD1Q99728 777 aaKnown RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 PIP5K1AQ99755 562 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 ANGPTL4Q9BY76 406 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 LAT2Q9GZY6 243 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 DCLRE1BQ9H816 532 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 YY1AP1Q9H869 796 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 RNPEPL1Q9HAU8 725 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 ZNF71Q9NQZ8 489 aaPredicted RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 AGPAT4Q9NRZ5 378 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 CNIH4Q9P003 139 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 TESQ9UGI8 421 aaKnown RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 SLC7A7Q9UM01 511 aa9.7□□□□□ -0.86
SOX6-213ENST00000530378 SAMHD1Q9Y3Z3 626 aaKnown RBP9.7□□□□□ -0.86
SOX6-213ENST00000530378 DNAJC13O75165 2243 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 TRBV4-1A0A0J9YWV2 114 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 A0A1B0GWA3 101 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 LRRC3CA6NJW4 275 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 FAM166BA8MTA8 275 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 KPNA4O00629 521 aaPredicted RBP9.69□□□□□ -0.86
SOX6-213ENST00000530378 PEX1O43933 1283 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 SP1P08047 785 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 RFPL3SP0C7P2 107 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 ITGA2P17301 1181 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 ADH7P40394 386 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 MEOX1P50221 254 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 TNFSF10P50591 281 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 P2RX1P51575 399 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 COPZ1P61923 177 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
SOX6-213ENST00000530378 C17orf67Q0P5P2 114 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 TRIP10Q15642 601 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 EXOC3L2Q2M3D2 409 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 LPCAT4Q643R3 524 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 ZNF550Q7Z398 422 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 PIWIL3Q7Z3Z3 882 aaKnown RBP9.69□□□□□ -0.86
SOX6-213ENST00000530378 GDF7Q7Z4P5 450 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 GRAMD2AQ8IUY3 354 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 SULF2Q8IWU5 870 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 TOR1AIP2Q8NFQ8 470 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 OR2M7Q8NG81 312 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 OR2M3Q8NG83 312 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 PHF10Q8WUB8 498 aaKnown RBP9.69□□□□□ -0.86
SOX6-213ENST00000530378 ABHD17AQ96GS6 310 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 SLC41A3Q96GZ6 507 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 ZNF597Q96LX8 424 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 SECISBP2Q96T21 854 aaKnown RBP9.69□□□□□ -0.86
SOX6-213ENST00000530378 ZNF559Q9BR84 538 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 FNDC11Q9BVV2 318 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 RPS6KB2Q9UBS0 482 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 DNAJB9Q9UBS3 223 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 ZMIZ1Q9ULJ6 1067 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 TP53TG5Q9Y2B4 290 aa9.69□□□□□ -0.86
SOX6-213ENST00000530378 RPH3AQ9Y2J0 694 aaPredicted RBP9.69□□□□□ -0.86
SOX6-213ENST00000530378 MKRN2OSH3BPM6 223 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 PDLIM1O00151 329 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 SNPHO15079 494 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 PIP5K1CO60331 668 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 NME2P1O60361 137 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 EIF4E2O60573 245 aaKnown RBP9.68□□□□□ -0.86
SOX6-213ENST00000530378 DEAF1O75398 565 aaPredicted RBP9.68□□□□□ -0.86
SOX6-213ENST00000530378 PRSS23O95084 383 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 FCGR1AP12314 374 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 CD46P15529 392 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 ZNF23P17027 643 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 RHCEP18577 417 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 NME2P22392 152 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 PEX2P28328 305 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 CBFBQ13951 182 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 QPRTQ15274 297 aa9.68□□□□□ -0.86
SOX6-213ENST00000530378 ANKRD34AQ69YU3 496 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms