RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 IQCCQ4KMZ1 466 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 UBAP2Q5T6F2 1119 aaKnown RBP7.93□□□□□ -1.14
VPS11-203ENST00000529545 GALNT5Q7Z7M9 940 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 UBE2J2Q8N2K1 259 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 OR52N5Q8NH56 324 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 FBXO27Q8NI29 283 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS11-203ENST00000529545 FBXO25Q8TCJ0 367 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 PHOSPHO1Q8TCT1 267 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 C3orf49Q96BT1 292 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 MSI2Q96DH6 328 aaKnown RBP7.93□□□□□ -1.14
VPS11-203ENST00000529545 INPP5KQ9BT40 448 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 TRMOQ9BU70 441 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 PLA2G12AQ9BZM1 189 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 CXorf36Q9H7Y0 433 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 FKRPQ9H9S5 495 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 EML4Q9HC35 981 aaKnown RBP7.93□□□□□ -1.14
VPS11-203ENST00000529545 MYNNQ9NPC7 610 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 SIRT5Q9NXA8 310 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 NPAP1Q9NZP6 1156 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 ZNF225Q9UK10 706 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 GPC6Q9Y625 555 aaPredicted RBP7.93□□□□□ -1.14
VPS11-203ENST00000529545 MALRD1Q5VYJ5 2156 aa7.93□□□□□ -1.14
VPS11-203ENST00000529545 IGHV3-15A0A0B4J1V0 119 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 A0A1W2PQD3 144 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 POM121CA8CG34 1229 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ZNF724A8MTY0 619 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 C9JVG2 144 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 M0R1B8 84 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 GTPBP1O00178 669 aaKnown RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 RAD51DO75771 328 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 KCNK2O95069 426 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ALOX5P09917 674 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 COX5AP20674 150 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ENPP1P22413 925 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 SRP14P37108 136 aaKnown RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 PRIM2P49643 509 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 SERPINB9P50453 376 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 PKNOX1P55347 436 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 SUMO3P55854 103 aaPredicted RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 CARTPTQ16568 116 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 PRSS53Q2L4Q9 553 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 FAM71E1Q6IPT2 247 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 IKBIPQ70UQ0 350 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ZNF551Q7Z340 670 aaPredicted RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 MTERF4Q7Z6M4 381 aaKnown RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 MEX3DQ86XN8 651 aaKnown RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 ZNF433Q8N7K0 673 aaPredicted RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 COX18Q8N8Q8 333 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ZNF527Q8NB42 609 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ZNF540Q8NDQ6 660 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ZFP28Q8NHY6 868 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 CHMP6Q96FZ7 201 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 MRGPRX4Q96LA9 322 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 PSD2Q9BQI7 771 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 HOXD1Q9GZZ0 328 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ACSS3Q9H6R3 686 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 MYOZ1Q9NP98 299 aaPredicted RBP7.92□□□□□ -1.14
VPS11-203ENST00000529545 EMC3Q9P0I2 261 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 NTMQ9P121 344 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 ATP23Q9Y6H3 246 aa7.92□□□□□ -1.14
VPS11-203ENST00000529545 PDPK1O15530 556 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 EFNA2O43921 213 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 CYTIPO60759 359 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ATP6V1C1P21283 382 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 CFPP27918 469 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 APOBEC3AP31941 199 aaPredicted RBP7.91□□□□□ -1.14
VPS11-203ENST00000529545 MAP3K8P41279 467 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 NR4A2P43354 598 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 MAGEA12P43365 314 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 HTR6P50406 440 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 P2RX1P51575 399 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 POU6F2P78424 691 aaPredicted RBP7.91□□□□□ -1.14
VPS11-203ENST00000529545 ZNF117Q03924 483 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 SPOCK1Q08629 439 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 LCP2Q13094 533 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 SELENBP1Q13228 472 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 CD226Q15762 336 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 CR1LQ2VPA4 569 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 UNC50Q53HI1 259 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ARSJQ5FYB0 599 aaPredicted RBP7.91□□□□□ -1.14
VPS11-203ENST00000529545 ZNF678Q5SXM1 525 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 FAM219BQ5XKK7 198 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 FBXW9Q5XUX1 488 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 OR7E24Q6IFN5 339 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ZCCHC12Q6PEW1 402 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 BHLHB9Q6PI77 547 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 SLC16A11Q8NCK7 471 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 SPATA4Q8NEY3 305 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 NUP43Q8NFH3 380 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 FAM76AQ8TAV0 307 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 FBXO30Q8TB52 745 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 JADE3Q92613 823 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ZMYND19Q96E35 227 aaPredicted RBP7.91□□□□□ -1.14
VPS11-203ENST00000529545 MS4A4EQ96PG1 132 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ADAM19Q9H013 955 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 COQ10BQ9H8M1 238 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ASB6Q9NWX5 421 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 TIMM22Q9Y584 194 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 ACTL7BQ9Y614 415 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms