RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 FCGR1AP12314 374 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 HOXB6P17509 224 aaKnown RBP22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 ENDOUP21128 410 aaKnown RBP22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 ZNF440Q8IYI8 595 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 HS3ST5Q8IZT8 346 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 ICA1LQ8NDH6 482 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 GPR119Q8TDV5 335 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 CENPNQ96H22 339 aaPredicted RBP22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 NPAS1Q99742 590 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 MAN2C1Q9NTJ4 1040 aa22.5■■□□□ 1.19
LDLRAD3-203ENST00000528989 TRIM3O75382 744 aaPredicted RBP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SP1P08047 785 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 PTNP21246 168 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 CNR1P21554 472 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 MASP1P48740 699 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 TNFSF10P50591 281 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SLC34A1Q06495 639 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SULF2Q8IWU5 870 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SNRNP27Q8WVK2 155 aaKnown RBP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 BARD1Q99728 777 aaKnown RBP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 ZNF559Q9BR84 538 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 FNDC11Q9BVV2 318 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 C6orf203Q9P0P8 240 aaPredicted RBP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SLC7A7Q9UM01 511 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SNX4O95219 450 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 LSM11P83369 360 aaKnown RBP eCLIP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 LRRC36Q1X8D7 754 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SLC25A25Q6KCM7 469 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 GDF7Q7Z4P5 450 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 GALNTL5Q7Z4T8 443 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 CYP4Z1Q86W10 505 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 PLCZ1Q86YW0 608 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 LSMEM1Q8N8F7 131 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 OR2M3Q8NG83 312 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 BDH2Q9BUT1 245 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 SAMHD1Q9Y3Z3 626 aaKnown RBP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 PCDHGA9Q9Y5G4 932 aaKnown RBP22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 LYVE1Q9Y5Y7 322 aa22.49■■□□□ 1.19
LDLRAD3-203ENST00000528989 IGLV3-32A0A0A0MS00 114 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 A0A1B0GWA3 101 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 FMO6PO60774 539 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 TCEA1P23193 301 aaKnown RBP22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 RFC3P40938 356 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 CBFBQ13951 182 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 LPCAT4Q643R3 524 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 KDF1Q8NAX2 398 aaPredicted RBP22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 TOR1AIP2Q8NFQ8 470 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 OR1J4Q8NGS1 313 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 ZNF563Q8TA94 476 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 RNF217Q8TC41 542 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 NRG4Q8WWG1 115 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 ABHD17AQ96GS6 310 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 SLC41A3Q96GZ6 507 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 TMEM27Q9HBJ8 222 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 TUBA8Q9NY65 449 aaPredicted RBP22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 VDAC3Q9Y277 283 aa22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 TNRC6AQ8NDV7 1962 aaKnown RBP22.48■■□□□ 1.19
LDLRAD3-203ENST00000528989 SNPHO15079 494 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 GADD45GO95257 159 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 COPZ1P61923 177 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 FOXO1Q12778 655 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 TIGD3Q6B0B8 471 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 WDR88Q6ZMY6 472 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 NKAIN4Q8IVV8 208 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 FADS6Q8N9I5 356 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 TMEM41AQ96HV5 264 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 REEP1Q9H902 201 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 OAZ3Q9UMX2 235 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 BSNQ9UPA5 3926 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 TRBV4-1A0A0J9YWV2 114 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 SAC3D1A6NKF1 404 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 TNFRSF11BO00300 401 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 ADAMDEC1O15204 470 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 LYPD3O95274 346 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 H1F0P07305 194 aaKnown RBP22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 RFPL3SP0C7P2 107 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 FOXK1P85037 733 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 QPRTQ15274 297 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 ZNF766Q5HY98 468 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 COLEC12Q5KU26 742 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 TBPL2Q6SJ96 375 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 PIK3C3Q8NEB9 887 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 OR2M7Q8NG81 312 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 SLC7A13Q8TCU3 470 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 DHRS1Q96LJ7 313 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 CIB1Q99828 191 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 TRIM2Q9C040 744 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 EVA1AQ9H8M9 152 aa22.47■■□□□ 1.19
LDLRAD3-203ENST00000528989 A0A0B4J2E0 115 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 A0A1B0GX12 115 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 TRAPPC13A5PLN9 417 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 ANKUB1A6NFN9 424 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 LRRC3CA6NJW4 275 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 SHISA8B8ZZ34 492 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 PDLIM1O00151 329 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 PEX1O43933 1283 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 NME2P1O60361 137 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 E2F6O75461 281 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 CD46P15529 392 aa22.46■■□□□ 1.19
LDLRAD3-203ENST00000528989 PGCP20142 388 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms