RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CA3P07451 260 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 HK1P19367 917 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 C3orf38Q5JPI3 329 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 OR4K14Q8NGD5 310 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 TRMT10AQ8TBZ6 339 aaKnown RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 WFIKKN2Q8TEU8 576 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 SMPDL3BQ92485 455 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 FAAHO00519 579 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 CLDN4O14493 209 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 XKRYO14609 159 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 HMGN1P05114 100 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 POU3F2P20265 443 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 ITGB8P26012 769 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 GRK6P43250 576 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 GIPRP48546 466 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 OC90Q02509 493 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 LTB4RQ15722 352 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 PLA1AQ53H76 456 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF385BQ569K4 471 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 OR4C11Q6IEV9 310 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 SLC36A4Q6YBV0 504 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 DGLUCYQ7Z3D6 616 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 TMED4Q7Z7H5 227 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 LSRQ86X29 649 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 LRRC28Q86X40 367 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 PDZD9Q8IXQ8 264 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 SPRYD4Q8WW59 207 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 PTP4A1Q93096 173 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 CAMK1GQ96NX5 476 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 PELOQ9BRX2 385 aaKnown RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF768Q9H5H4 540 aaKnown RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 SPATA6Q9NWH7 488 aaPredicted RBP16.7■□□□□ 0.26
LTBP3-210ENST00000528516 CYB5R1Q9UHQ9 305 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 FLVCR2Q9UPI3 526 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 HCFC2Q9Y5Z7 792 aa16.7■□□□□ 0.26
LTBP3-210ENST00000528516 A0A0G2JPF8 293 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 TRDV1A0A1B0GX56 115 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 IRGMA1A4Y4 181 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 UBE2QL1A1L167 161 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 HNRNPCL3B7ZW38 293 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 PRKNO60260 465 aaPredicted RBP16.69■□□□□ 0.26
LTBP3-210ENST00000528516 HNRNPCL4P0DMR1 293 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SHC2P98077 582 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SFRP5Q5T4F7 317 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 PLA2G15Q8NCC3 412 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 OR8S1Q8NH09 359 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SCMH1Q96GD3 660 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SPDEFO95238 335 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 HLA-DQB1P01920 261 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 DBIP07108 87 aaKnown RBP16.69■□□□□ 0.26
LTBP3-210ENST00000528516 HOXB9P17482 250 aaPredicted RBP16.69■□□□□ 0.26
LTBP3-210ENST00000528516 RAB3BP20337 219 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 TAS2R38P59533 333 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 C18orf63Q68DL7 685 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 ELP2Q6IA86 826 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SLCO4C1Q6ZQN7 724 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 STPG2Q8N412 459 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 CLRN3Q8NCR9 226 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 PCDHGA9Q9Y5G4 932 aaKnown RBP16.69■□□□□ 0.26
LTBP3-210ENST00000528516 ANXA2P2A6NMY6 339 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SLC16A5O15375 505 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 LPLP06858 475 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 ANXA2P07355 339 aaKnown RBP16.69■□□□□ 0.26
LTBP3-210ENST00000528516 NPPBP16860 134 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 ELAVL4P26378 380 aaKnown RBP16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SELENOPP49908 381 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 LIM2P55344 173 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 SQSTM1Q13501 440 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 ERV3-1Q14264 604 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 NDC1Q9BTX1 674 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 KIF25Q9UIL4 384 aa16.69■□□□□ 0.26
LTBP3-210ENST00000528516 ELOA3DA6NLF2 546 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 PRSS44E7EML9 344 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 LDOC1O95751 146 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 FLI1Q01543 452 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 TPBGQ13641 420 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ELOA3BQ3SY89 546 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 TMEM91Q6ZNR0 172 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 USP53Q70EK8 1073 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ACOT4Q8N9L9 421 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ELOA3Q8NG57 546 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ADAMTS14Q8WXS8 1223 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ZMYND19Q96E35 227 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 MS4A3Q96HJ5 214 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 TMEM168Q9H0V1 697 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 H3BNC9 293 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 RFXAPO00287 272 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 FAM157BP0CG42 384 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 APEHP13798 732 aaKnown RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 HSD3B1P14060 373 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 HSD3B2P26439 372 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 SHC1P29353 583 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 TAS2R3Q9NYW6 316 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 POMT2Q9UKY4 750 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 KCNMB2Q9Y691 235 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 UNC13CQ8NB66 2214 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 EXOSC7Q15024 291 aaKnown RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 CST6Q15828 149 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms