RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 EPXP11678 715 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 IL7RP16871 459 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 IGFBP2P18065 325 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 CCNA2P20248 432 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 DNASE1P24855 282 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 MAP3K8P41279 467 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ART1P52961 327 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 SORDQ00796 357 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 KEAP1Q14145 624 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ARHGAP11BQ3KRB8 267 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 PDCD4Q53EL6 469 aaKnown RBP8.16□□□□□ -1.1
CMTM1-210ENST00000528441 C3orf33Q6P1S2 294 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 CBLN3Q6UW01 205 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ARFGAP2Q8N6H7 521 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 METTL25Q8N6Q8 603 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 OR5W2Q8NH69 310 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ZFP90Q8TF47 636 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 WDR60Q8WVS4 1066 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ROBO4Q8WZ75 1007 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 NRGNQ92686 78 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 HOXB13Q92826 284 aaPredicted RBP8.16□□□□□ -1.1
CMTM1-210ENST00000528441 OSTF1Q92882 214 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 CPNE4Q96A23 557 aaPredicted RBP8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ZHX1-C8orf76Q96EF9 292 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 NEURL3Q96EH8 262 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 THOC1Q96FV9 657 aaKnown RBP8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ITCHQ96J02 903 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 OR5B2Q96R09 309 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 INPP5KQ9BT40 448 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 PCNX3Q9H6A9 2034 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 TCF7L2Q9NQB0 619 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 KLHL28Q9NXS3 571 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF226Q9NYT6 803 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 P2RX2Q9UBL9 471 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 HAO1Q9UJM8 370 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 SLC35A3Q9Y2D2 325 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 UNC79Q9P2D8 2635 aa8.16□□□□□ -1.1
CMTM1-210ENST00000528441 IGHV3-15A0A0B4J1V0 119 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 A0A0J9YW62 118 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 A0A1W2PNR3 127 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 HMGB1P1B2RPK0 211 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-210ENST00000528441 B4DXG7 233 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 OIP5O43482 229 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 FCMRO60667 390 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 SASH3O75995 380 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 AQP8O94778 261 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 H6PDO95479 791 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 BCHEP06276 602 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 ELK4P28324 431 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 CD79BP40259 229 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 CDKN2CP42773 168 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 POLR2JP52435 117 aaKnown RBP8.15□□□□□ -1.1
CMTM1-210ENST00000528441 SLC18A1P54219 525 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 PPP2R2AP63151 447 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 FAM27E3Q08E93 113 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 FBXL19-AS1Q494R0 122 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 KLHL26Q53HC5 615 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.15□□□□□ -1.1
CMTM1-210ENST00000528441 SAXO2Q658L1 398 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 FAM214BQ7L5A3 538 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF550Q7Z398 422 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 BTLAQ7Z6A9 289 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 GGNQ86UU5 652 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 PEX5LQ8IYB4 626 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 CHDHQ8NE62 594 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-210ENST00000528441 NTNG2Q96CW9 530 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 ARSGQ96EG1 525 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 PIK3IP1Q96FE7 263 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 GMPPAQ96IJ6 420 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-210ENST00000528441 MRGPRX4Q96LA9 322 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 TEX37Q96LM6 180 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 CCDC115Q96NT0 180 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 OR52B2Q96RD2 323 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 NMUR2Q9GZQ4 415 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF350Q9GZX5 532 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 LAT2Q9GZY6 243 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 QRSL1Q9H0R6 528 aaKnown RBP8.15□□□□□ -1.1
CMTM1-210ENST00000528441 RAD21L1Q9H4I0 556 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 SERHL2Q9H4I8 314 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 ZIM2Q9NZV7 527 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 LIPT1Q9Y234 373 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 PLEKHA6Q9Y2H5 1048 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 GPR45Q9Y5Y3 372 aa8.15□□□□□ -1.1
CMTM1-210ENST00000528441 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 A8MXE2 369 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 C16orf97H3BN30 126 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 KIAA0513O60268 411 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 UGT2B17O75795 530 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 TNFSF13O75888 250 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 LINGO3P0C6S8 592 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 PRKCAP17252 672 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 NCF2P19878 526 aaPredicted RBP8.14□□□□□ -1.11
CMTM1-210ENST00000528441 IL11P20809 199 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 ENPP1P22413 925 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 IL32P24001 234 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 ADH6P28332 368 aa8.14□□□□□ -1.11
CMTM1-210ENST00000528441 IL12AP29459 219 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms