RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SIRPAP78324 504 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 HPCAP84074 193 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 EPGNQ6UW88 154 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 LINC01560Q8TB33 94 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 LRRC8CQ8TDW0 803 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 ST8SIA1Q92185 356 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 TRNT1Q96Q11 434 aaKnown RBP29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 ARGLU1Q9NWB6 273 aaPredicted RBP29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 ELOVL5Q9NYP7 299 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 EMC9Q9Y3B6 208 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 RFXANKO14593 260 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 EFNA2O43921 213 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 DIAPH2O60879 1101 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 SS18L1O75177 396 aaPredicted RBP29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 NID1P14543 1247 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 CPOXP36551 454 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 CD79BP40259 229 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 SELENBP1Q13228 472 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 QPRTQ15274 297 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 MAPK14Q16539 360 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 ZNF474Q6S9Z5 364 aaPredicted RBP29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 ZNF621Q6ZSS3 439 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 OLIG3Q7RTU3 272 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 HDXQ7Z353 690 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 OSTF1Q92882 214 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 SLC39A3Q9BRY0 314 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 TIGARQ9NQ88 270 aa29.6■■■□□ 2.33
SSSCA1-205ENST00000527920 PRAMEF27A3QJZ7 478 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 SH3D21A4FU49 640 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 OPN1LWP04000 364 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 ZCCHC18P0CG32 403 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 MRPL19P49406 292 aaKnown RBP29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 CCR4P51679 360 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 CARD18P57730 90 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 OR6K3Q8NGY3 331 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 RFWD2Q8NHY2 731 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 CPNE4Q96A23 557 aaPredicted RBP29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 MARK4Q96L34 752 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 NDRG3Q9UGV2 375 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 PROCRQ9UNN8 238 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 MPDZO75970 2070 aa29.59■■■□□ 2.33
SSSCA1-205ENST00000527920 HMGB1P1B2RPK0 211 aaPredicted RBP29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 KRT75O95678 551 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 PABPC4LP0CB38 370 aaKnown RBP29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 H2AFXP16104 143 aaPredicted RBP29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 SHC1P29353 583 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 SFTPDP35247 375 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 PGM1P36871 562 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 TESK1Q15569 626 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 GTF2IRD2BQ6EKJ0 949 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 GTF2IRD2Q86UP8 949 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 MIER2Q8N344 545 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 PMM1Q92871 262 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 ZNF524Q96C55 264 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 OPN3Q9H1Y3 402 aaPredicted RBP29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 RMND5AQ9H871 391 aa29.58■■■□□ 2.33
SSSCA1-205ENST00000527920 H6PDO95479 791 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 PLGP00747 810 aaPredicted RBP29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 C1QCP02747 245 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 UBTFL6P0CB48 400 aaPredicted RBP29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 PGCP20142 388 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 ZNF239Q16600 458 aaKnown RBP29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 GPAT3Q53EU6 434 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 PPP4R4Q6NUP7 873 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 LRRC74BQ6ZQY2 392 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 GOLGA6L1Q8N7Z2 621 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 TMEM234Q8WY98 164 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 THUMPD3Q9BV44 507 aaKnown RBP29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 EXOSC3Q9NQT5 275 aaKnown RBP29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 PLSCR4Q9NRQ2 329 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 TESMINQ9Y4I5 508 aa29.57■■■□□ 2.32
SSSCA1-205ENST00000527920 ABCA4P78363 2273 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 GSNP06396 782 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 CHRNEQ04844 493 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 FAM27E3Q08E93 113 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 C3orf33Q6P1S2 294 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 CDC20BQ86Y33 519 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 CMIPQ8IY22 773 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 RNF128Q8TEB7 428 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 ZFP90Q8TF47 636 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 NINJ1Q92982 152 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 ITCHQ96J02 903 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 SLC38A1Q9H2H9 487 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 SLCO1B3Q9NPD5 702 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 TCF7L2Q9NQB0 619 aa29.56■■■□□ 2.32
SSSCA1-205ENST00000527920 FAM234BA2RU67 622 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 DNAJA1P31689 397 aaKnown RBP29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 POLR2JP52435 117 aaKnown RBP29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 CTBP2P56545 445 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 KCNJ10P78508 379 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 TMEM176BQ3YBM2 270 aaPredicted RBP29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 ZG16BQ96DA0 208 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 COQ10BQ9H8M1 238 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 GP6Q9HCN6 339 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 ST6GALNAC1Q9NSC7 600 aaPredicted RBP29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 ACER3Q9NUN7 267 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 ITGB1BP2Q9UKP3 347 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 AKAP6Q13023 2319 aa29.55■■■□□ 2.32
SSSCA1-205ENST00000527920 AGAP5A6NIR3 686 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 POLR3GO15318 223 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms