RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DEFB126Q9BYW3 111 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF226Q9NYT6 803 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 PEX12O00623 359 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 KIAA0513O60268 411 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 CDC42P60953 191 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 Q0VFX4 171 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ST3GAL3Q11203 375 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 TRAM2Q15035 370 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ENTPD8Q5MY95 495 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ATP1A1-AS1Q5TC04 95 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 PRR22Q8IZ63 422 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 DIO2Q92813 273 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 EFHD2Q96C19 240 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-203ENST00000527275 IMPAD1Q9NX62 359 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 MYOTQ9UBF9 498 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 KCNE5Q9UJ90 142 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 WWP2O00308 870 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 WT1P19544 449 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-203ENST00000527275 COX10Q12887 443 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 C1orf94Q6P1W5 598 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 OR5L2Q8NGL0 311 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 OR13F1Q8NGS4 319 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 TP53INP1Q96A56 240 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 POLE3Q9NRF9 147 aa17.24■□□□□ 0.35
SMPD1-203ENST00000527275 A0A087WUU8 490 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 NPIPA5A0A0B4J1W7 369 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 NPIPA7E9PJI5 369 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF354AO60765 605 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-203ENST00000527275 NPIPA8P0DM63 369 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 ICAM2P13598 275 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 NID1P14543 1247 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 GABRB1P18505 474 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 PCMT1P22061 227 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 ABCD3P28288 659 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 PEX19P40855 299 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 LSM11P83369 360 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMPD1-203ENST00000527275 DECR1Q16698 335 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 AP1ARQ63HQ0 302 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 PLEKHM3Q6ZWE6 761 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 CCDC103Q8IW40 242 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 IPCEF1Q8WWN9 437 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-203ENST00000527275 RHNO1Q9BSD3 238 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 G6PC3Q9BUM1 346 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 PTTG2Q9NZH5 202 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 NTNG1Q9Y2I2 539 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 PCDHGB1Q9Y5G3 927 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 H3BN98 237 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 TO15178 435 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 SOX14O95416 240 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 IGFBP1P08833 259 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-203ENST00000527275 GPR107Q5VW38 600 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 CD300LDQ6UXZ3 194 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 HSPBAP1Q96EW2 488 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 LHPPQ9H008 270 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 ANKRD19PQ9H560 264 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 CCNB1IP1Q9NPC3 277 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 PLCXD1Q9NUJ7 323 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 NCOR2Q9Y618 2525 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 MED13Q9UHV7 2174 aa17.23■□□□□ 0.35
SMPD1-203ENST00000527275 CNTRLQ7Z7A1 2325 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 DOCK10Q96BY6 2186 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 NKX2-8O15522 239 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 RGS10O43665 173 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
SMPD1-203ENST00000527275 SEC14L2O76054 403 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 TEKQ02763 1124 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 EMX1Q04741 257 aaPredicted RBP17.22■□□□□ 0.35
SMPD1-203ENST00000527275 TUBA3CQ13748 450 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 FLYWCH1Q4VC44 716 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 DCAF10Q5QP82 559 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 MRPL2Q5T653 305 aaKnown RBP17.22■□□□□ 0.35
SMPD1-203ENST00000527275 ISOC1Q96CN7 298 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 IP6K3Q96PC2 410 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 ADOQ96SZ5 270 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 PCDHGA10Q9Y5H3 936 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF701M0R085 212 aaPredicted RBP17.22■□□□□ 0.35
SMPD1-203ENST00000527275 MRPS14O60783 128 aaKnown RBP17.22■□□□□ 0.35
SMPD1-203ENST00000527275 OR2J2O76002 312 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 OR5F1O95221 314 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 IFNGR2P38484 337 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF136P52737 540 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 PLCXD2Q0VAA5 305 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMPD1-203ENST00000527275 GTF2IRD2BQ6EKJ0 949 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 DESI1Q6ICB0 168 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF730Q6ZMV8 503 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 GTF2IRD2Q86UP8 949 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 ALDH16A1Q8IZ83 802 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 KCNE4Q8WWG9 221 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 SLC41A3Q96GZ6 507 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 GPA33Q99795 319 aa17.22■□□□□ 0.35
SMPD1-203ENST00000527275 CDHR4A6H8M9 788 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 M0R129 80 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 MPZL2O60487 215 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 REM1O75628 298 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 IL33O95760 270 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 TP53P04637 393 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-203ENST00000527275 PRKAR1AP10644 381 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 DCKP27707 260 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 NRG3P56975 720 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms