RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NTN4Q9HB63 628 aa11.67□□□□□ -0.54
SSRP1-203ENST00000526696 FARSBQ9NSD9 589 aaKnown RBP11.67□□□□□ -0.54
SSRP1-203ENST00000526696 RNF14Q9UBS8 474 aa11.67□□□□□ -0.54
SSRP1-203ENST00000526696 C19orf53Q9UNZ5 99 aaPredicted RBP11.67□□□□□ -0.54
SSRP1-203ENST00000526696 AMDHD2Q9Y303 409 aa11.67□□□□□ -0.54
SSRP1-203ENST00000526696 CORINQ9Y5Q5 1042 aa11.67□□□□□ -0.54
SSRP1-203ENST00000526696 IGKV3D-15A0A087WSY6 115 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 A0A087WV62 115 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 hCG_2039718K7EN88 272 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 COQ9O75208 318 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 TFP02787 698 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 NGFRP08138 427 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 GABRA3P34903 492 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 GP5P40197 560 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
SSRP1-203ENST00000526696 ADRM1Q16186 407 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
SSRP1-203ENST00000526696 SGO1Q5FBB7 561 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 ELFN2Q5R3F8 820 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 ABLIM2Q6H8Q1 611 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 CCDC137Q6PK04 289 aaKnown RBP11.66□□□□□ -0.54
SSRP1-203ENST00000526696 C1orf52Q8N6N3 182 aaKnown RBP11.66□□□□□ -0.54
SSRP1-203ENST00000526696 GRPEL1Q9HAV7 217 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 FBXO9Q9UK97 447 aaPredicted RBP11.66□□□□□ -0.54
SSRP1-203ENST00000526696 SLC12A4Q9UP95 1085 aa11.66□□□□□ -0.54
SSRP1-203ENST00000526696 DYNC2H1Q8NCM8 4307 aaKnown RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 GJE1A6NN92 205 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 ZNF716A6NP11 495 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 DNALI1O14645 258 aaPredicted RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 KLF11O14901 512 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 H6PDO95479 791 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 STMN1P16949 149 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 COL8A2P25067 703 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 CALCRP30988 508 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 PSMD4P55036 377 aaKnown RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 TRA2BP62995 288 aaKnown RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 ZP4Q12836 540 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 SLC29A2Q14542 456 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 PFKFB4Q16877 469 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 TMEM107Q6UX40 140 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 ANKMY2Q8IV38 441 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 CDK20Q8IZL9 346 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 OR2L13Q8N349 312 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 C17orf78Q8N4C9 275 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 TEX29Q8N6K0 151 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 SYT14Q8NB59 555 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 SLC16A11Q8NCK7 471 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 B4GALNT2Q8NHY0 566 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 NANPQ8TBE9 248 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 TSPAN17Q96FV3 270 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 GPR22Q99680 433 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 TPK1Q9H3S4 243 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 NOL11Q9H8H0 719 aaKnown RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 SEC61A2Q9H9S3 476 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 SENP1Q9P0U3 644 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 MRTO4Q9UKD2 239 aaKnown RBP11.65□□□□□ -0.54
SSRP1-203ENST00000526696 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
SSRP1-203ENST00000526696 COL7A1Q02388 2944 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 KIF2AO00139 706 aaPredicted RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 ESRRBO95718 433 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 RNASE1P07998 156 aaKnown RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 OMGP23515 440 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 ZNF117Q03924 483 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 HGFACQ04756 655 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 TRAF3Q13114 568 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 FASTKD3Q14CZ7 662 aaKnown RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 TSNAXIP1Q2TAA8 658 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 CBLN3Q6UW01 205 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 DOK3Q7L591 496 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 RELL1Q8IUW5 271 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 SPC24Q8NBT2 197 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 CCT8L2Q96SF2 557 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 SLC52A3Q9NQ40 469 aa11.64□□□□□ -0.55
SSRP1-203ENST00000526696 NOSIPQ9Y314 301 aaKnown RBP11.64□□□□□ -0.55
SSRP1-203ENST00000526696 MYO1GB0I1T2 1018 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 PIN1P1O15428 100 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 PLPP2O43688 288 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 JUNP05412 331 aaKnown RBP11.63□□□□□ -0.55
SSRP1-203ENST00000526696 ADRA2AP08913 450 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 PRKCAP17252 672 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 FPR2P25090 351 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 IVDP26440 423 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 SLC7A1P30825 629 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 THBS4P35443 961 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 MAP3K8P41279 467 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 RNF144AP50876 292 aaPredicted RBP11.63□□□□□ -0.55
SSRP1-203ENST00000526696 PRPS1P60891 318 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 RAE1P78406 368 aaKnown RBP11.63□□□□□ -0.55
SSRP1-203ENST00000526696 HIKESHIQ53FT3 197 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 CMC1Q7Z7K0 106 aa11.63□□□□□ -0.55
SSRP1-203ENST00000526696 C1orf162Q8NEQ5 155 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms