RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OR3A2P47893 321 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 CDH11P55287 796 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 SUMO3P55854 103 aaPredicted RBP21.21■□□□□ 0.99
USP47-205ENST00000525257 PPA1Q15181 289 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 FAM153CQ494X1 144 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 DCST2Q5T1A1 773 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 ZNF614Q8N883 585 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 RFWD2Q8NHY2 731 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 NANOS1Q8WY41 292 aaKnown RBP21.21■□□□□ 0.99
USP47-205ENST00000525257 ZNF775Q96BV0 537 aaPredicted RBP21.21■□□□□ 0.99
USP47-205ENST00000525257 ZNF524Q96C55 264 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 MTERF3Q96E29 417 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 ANKZF1Q9H8Y5 726 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 BCO1Q9HAY6 547 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 SHISA9B4DS77 424 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 SSX4O60224 188 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 BCKDHAP12694 445 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 EDNRAP25101 427 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 HPCAL1P37235 193 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 ASMTP46597 345 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 SELENBP1Q13228 472 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 TP53BP2Q13625 1128 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 MLC1Q15049 377 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 LIPMQ5VYY2 423 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 R3HCC1LQ7Z5L2 792 aaKnown RBP21.2■□□□□ 0.98
USP47-205ENST00000525257 DTX2Q86UW9 622 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 TMCO5AQ8N6Q1 288 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 OR2W6PQ8NHA6 318 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 MRGPRX4Q96LA9 322 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 HOXD1Q9GZZ0 328 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 L2HGDHQ9H9P8 463 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 FAIMQ9NVQ4 179 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 TMED5Q9Y3A6 229 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 KCNE3Q9Y6H6 103 aa21.2■□□□□ 0.98
USP47-205ENST00000525257 A8MV72 311 aaPredicted RBP21.19■□□□□ 0.98
USP47-205ENST00000525257 SCAMP2O15127 329 aaKnown RBP21.19■□□□□ 0.98
USP47-205ENST00000525257 CHEK2O96017 543 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 CCT5P48643 541 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 CCR4P51679 360 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 RAC3P60763 192 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 RASGEF1BQ0VAM2 473 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 CHRFAM7AQ494W8 412 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 IFT20Q8IY31 132 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 OR7A2PQ8NGA2 310 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 ADAMTS15Q8TE58 950 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 MUCL1Q96DR8 90 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 ZNF300Q96RE9 604 aaPredicted RBP21.19■□□□□ 0.98
USP47-205ENST00000525257 ACTRT3Q9BYD9 372 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 NPAP1Q9NZP6 1156 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 ATP6V1HQ9UI12 483 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 DNAJC15Q9Y5T4 150 aa21.19■□□□□ 0.98
USP47-205ENST00000525257 IGHV4-30-2A0A087WSY4 118 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 ABCD4O14678 606 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 SMAD9O15198 467 aaKnown RBP21.18■□□□□ 0.98
USP47-205ENST00000525257 GPRIN2O60269 458 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 CRHR1P34998 444 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 CCT3P49368 545 aaKnown RBP21.18■□□□□ 0.98
USP47-205ENST00000525257 ATP12AP54707 1039 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 KANK2Q63ZY3 851 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 RNF165Q6ZSG1 346 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 C10orf107Q8IVU9 208 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 DDIASQ8IXT1 998 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 CNPY4Q8N129 248 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 RHNO1Q9BSD3 238 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 TXLNGYQ9BZA5 131 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 GIMAP2Q9UG22 337 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 FAF1Q9UNN5 650 aaPredicted RBP21.18■□□□□ 0.98
USP47-205ENST00000525257 B3GALT5Q9Y2C3 310 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 DTNAQ9Y4J8 743 aa21.18■□□□□ 0.98
USP47-205ENST00000525257 TMEM233B4DJY2 109 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 H6PDO95479 791 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 LAMP1P11279 417 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 DDX5P17844 614 aaKnown RBP21.17■□□□□ 0.98
USP47-205ENST00000525257 IGHV1-2P23083 117 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 NUDT6P53370 316 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 QPRTQ15274 297 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 SPDYE7PQ495Y7 208 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 SLC25A53Q5H9E4 307 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 TOR1AIP2Q8NFQ8 470 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 OR56A1Q8NGH5 318 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 OR5W2Q8NH69 310 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 OR5B2Q96R09 309 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 GATA5Q9BWX5 397 aaPredicted RBP21.17■□□□□ 0.98
USP47-205ENST00000525257 GRIP2Q9C0E4 1043 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 GPATCH2Q9NW75 528 aa21.17■□□□□ 0.98
USP47-205ENST00000525257 PLCE1Q9P212 2302 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 ALPK2Q86TB3 2170 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 NPIPB9F8W1W9 429 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 COPEO14579 308 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 CYTIPO60759 359 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 UBL4AP11441 157 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 GGT1P19440 569 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 NRF1Q16656 503 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 TIMM23BQ5SRD1 257 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 AGAP6Q5VW22 663 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 C3orf33Q6P1S2 294 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 ZNF100Q8IYN0 542 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 TWIST2Q8WVJ9 160 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 TMEM158Q8WZ71 300 aa21.16■□□□□ 0.98
USP47-205ENST00000525257 OR5P2Q8WZ92 322 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms