RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	KRT78	Q8N1N4	520 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	GHDC	Q8N2G8	530 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	C9orf62	Q8N4C0	152 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ANKRD53	Q8N9V6	530 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR4C6	Q8NH72	309 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	DNAJA4	Q8WW22	397 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	DIO2	Q92813	273 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	RAB8B	Q92930	207 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	RAB7B	Q96AH8	199 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	AP2M1	Q96CW1	435 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	NXPE2	Q96DL1	559 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	BMF	Q96LC9	184 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	QRFPR	Q96P65	431 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	DCLRE1C	Q96SD1	692 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	TREX2	Q9BQ50	279 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	MENT	Q9BUN1	341 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PINK1	Q9BXM7	581 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	NRSN2	Q9GZP1	204 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PITHD1	Q9GZP4	211 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	AICDA	Q9GZX7	198 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ABCG4	Q9H172	646 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR52A5	Q9H2C5	316 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR51I1	Q9H343	314 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ANKRD19P	Q9H560	264 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	SRA1	Q9HD15	236 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	MIEF1	Q9NQG6	463 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	DIABLO	Q9NR28	239 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	MED17	Q9NVC6	651 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	B3GNT2	Q9NY97	397 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	MRPL39	Q9NYK5	338 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	AHSP	Q9NZD4	102 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	CLCA2	Q9UQC9	943 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ENTPD4	Q9Y227	616 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	GSTK1	Q9Y2Q3	226 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033		A0A087WUU8	490 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033		A0A0A6YYD5	115 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SPTY2D1-AS1	A0A0U1RR47	76 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	LINC00854	A0A1B0GVQ3	168 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033		A0A1W2PPV9	198 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	LINC00862	A6NCI5	91 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ANKDD1B	A6NHY2	528 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SHOX	O15266	292 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	RRP8	O43159	456 aa	Known RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	WIPF1	O43516	503 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC19A2	O60779	497 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	PIAS2	O75928	621 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	CRYZL1	O95825	349 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	MT-CO3	P00414	261 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC2A2	P11168	524 aa	Predicted RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ACP5	P13686	325 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	BTC	P35070	178 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	THBS2	P35442	1172 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	RABIF	P47224	123 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	OMP	P47874	163 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR3A3	P47888	321 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	CCT3	P49368	545 aa	Known RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	DUSP3	P51452	185 aa	Predicted RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	MAPK12	P53778	367 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	MANF	P55145	182 aa	Known RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	CAV3	P56539	151 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SNRPN	P63162	240 aa	Known RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	MAB21L1	Q13394	359 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	PIN1	Q13526	163 aa	Predicted RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	FGL2	Q14314	439 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	FZD2	Q14332	565 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ARHGAP19	Q14CB8	494 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	RTP5	Q14D33	572 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	WSCD2	Q2TBF2	565 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	BTBD16	Q32M84	506 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	TRIQK	Q629K1	86 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	MZT2A	Q6P582	158 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMEM107	Q6UX40	140 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	PAMR1	Q6UXH9	720 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMEM91	Q6ZNR0	172 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ZNF547	Q8IVP9	402 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	TRIM48	Q8IWZ4	208 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC22A18AS	Q8N1D0	253 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	CADM2	Q8N3J6	435 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033		Q8N402	240 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR6T1	Q8NGN1	323 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR4Q3	Q8NH05	313 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR2L2	Q8NH16	312 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SUN3	Q8TAQ9	357 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	UBASH3B	Q8TF42	649 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	DEDD2	Q8WXF8	326 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ACOT12	Q8WYK0	555 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	UCN3	Q969E3	161 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	CREB3L1	Q96BA8	519 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SCMH1	Q96GD3	660 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	IL17F	Q96PD4	163 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	TM9SF2	Q99805	663 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	DUSP23	Q9BVJ7	150 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	FNDC11	Q9BVV2	318 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	BEX2	Q9BXY8	128 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	GLIPR2	Q9H4G4	154 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	EGLN3	Q9H6Z9	239 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	DDX31	Q9H8H2	851 aa	Known RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	NLGN3	Q9NZ94	848 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms