RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 OR2V1Q8NHB1 315 aa17.17■□□□□ 0.34
FBXO28-205ENST00000523990 RFWD2Q8NHY2 731 aa17.17■□□□□ 0.34
FBXO28-205ENST00000523990 FBXO27Q8NI29 283 aa17.17■□□□□ 0.34
FBXO28-205ENST00000523990 ZFP90Q8TF47 636 aa17.17■□□□□ 0.34
FBXO28-205ENST00000523990 MRGPRX4Q96LA9 322 aa17.17■□□□□ 0.34
FBXO28-205ENST00000523990 LAT2Q9GZY6 243 aa17.17■□□□□ 0.34
FBXO28-205ENST00000523990 CCDC168Q8NDH2 2452 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 MSTNO14793 375 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 EFNA2O43921 213 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 CSTAP01040 98 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 UBTFL6P0CB48 400 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-205ENST00000523990 SHC1P29353 583 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 SFTPDP35247 375 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 PGM1P36871 562 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 SLC6A8P48029 635 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 ANXA11P50995 505 aaKnown RBP17.16■□□□□ 0.34
FBXO28-205ENST00000523990 MVDP53602 400 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 CHRNEQ04844 493 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 QPRTQ15274 297 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 SYPL1Q16563 259 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 EIF3MQ7L2H7 374 aaKnown RBP17.16■□□□□ 0.34
FBXO28-205ENST00000523990 TMEM200AQ86VY9 491 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 VPS33AQ96AX1 596 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 ZG16BQ96DA0 208 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 TRNT1Q96Q11 434 aaKnown RBP17.16■□□□□ 0.34
FBXO28-205ENST00000523990 QRSL1Q9H0R6 528 aaKnown RBP17.16■□□□□ 0.34
FBXO28-205ENST00000523990 SLC38A1Q9H2H9 487 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 RMND5AQ9H871 391 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 SLC35A3Q9Y2D2 325 aa17.16■□□□□ 0.34
FBXO28-205ENST00000523990 FAM234BA2RU67 622 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 TUBAL3A6NHL2 446 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 CXCL13O43927 109 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 BCAS1O75363 584 aaPredicted RBP17.15■□□□□ 0.34
FBXO28-205ENST00000523990 KRT75O95678 551 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 CHRM4P08173 479 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 ZCCHC18P0CG32 403 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 AQP5P55064 265 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 SIRPAP78324 504 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 PLAURQ03405 335 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 HBMQ6B0K9 141 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 PPP4R4Q6NUP7 873 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 BTLAQ7Z6A9 289 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 ANKFN1Q8N957 763 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 FAM222BQ8WU58 562 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 CKAP2Q8WWK9 683 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 ITCHQ96J02 903 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 MAGEB18Q96M61 343 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 CCDC28BQ9BUN5 200 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 THUMPD3Q9BV44 507 aaKnown RBP17.15■□□□□ 0.34
FBXO28-205ENST00000523990 MCTS1Q9ULC4 181 aaKnown RBP17.15■□□□□ 0.34
FBXO28-205ENST00000523990 LIPT1Q9Y234 373 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 SPG11Q96JI7 2443 aa17.15■□□□□ 0.34
FBXO28-205ENST00000523990 FAM221AA4D161 298 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 CTAG2O75638 210 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 CYP7B1O75881 506 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 SMNDC1O75940 238 aaKnown RBP eCLIP17.14■□□□□ 0.33
FBXO28-205ENST00000523990 NID1P14543 1247 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 CPOXP36551 454 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 MAGEA8P43361 318 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 STX1BP61266 288 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 SELENBP1Q13228 472 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 GTDC1Q4AE62 458 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 LRRC74BQ6ZQY2 392 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 FAM214BQ7L5A3 538 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 HMGN2P46Q86SG4 172 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 LURAP1LQ8IV03 231 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 ST8SIA1Q92185 356 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 PRRG4Q9BZD6 226 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 TPT1P8Q9HAU6 139 aa17.14■□□□□ 0.33
FBXO28-205ENST00000523990 CLDN24A6NM45 220 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 GJE1A6NN92 205 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 ENO4A6NNW6 628 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 ANP32DO95626 131 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 CGAP01215 116 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 CD8BP10966 210 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 RPS4Y1P22090 263 aaKnown RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 MAPK11Q15759 364 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 ZNF239Q16600 458 aaKnown RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 PDSS1Q5T2R2 415 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 CDH24Q86UP0 819 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 LINC01560Q8TB33 94 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 GTF2H4Q92759 462 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 AURKBQ96GD4 344 aaPredicted RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 GMPPAQ96IJ6 420 aaPredicted RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 GPATCH1Q9BRR8 931 aaKnown RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 OPN3Q9H1Y3 402 aaPredicted RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 COQ10BQ9H8M1 238 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 A6NNC1 897 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 SS18L1O75177 396 aaPredicted RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 SYNGR4O95473 234 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 EPXP11678 715 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 ETFAP13804 333 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 HOXB9P17482 250 aaPredicted RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 PGCP20142 388 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 C6orf10Q5SRN2 563 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 C3orf33Q6P1S2 294 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 FUNDC1Q8IVP5 155 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 OSTF1Q92882 214 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 SRXN1Q9BYN0 137 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms