RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 CD53P19397 219 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 CRYGSP22914 178 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 KCNJ5P48544 419 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 SLC18A1P54219 525 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 DPY19L1Q2PZI1 675 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 TMEM176BQ3YBM2 270 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 STAC2Q6ZMT1 411 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 TGIF2LYQ8IUE0 185 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 RFWD2Q8NHY2 731 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 RNF128Q8TEB7 428 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 XAGE5Q8WWM1 108 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 TLCD1Q96CP7 247 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 ZG16BQ96DA0 208 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 MRGPRX4Q96LA9 322 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 CCDC115Q96NT0 180 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 MED18Q9BUE0 208 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 THUMPD3Q9BV44 507 aaKnown RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 LAT2Q9GZY6 243 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 SAP130Q9H0E3 1048 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 WDR55Q9H6Y2 383 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 COQ10BQ9H8M1 238 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 GLRX2Q9NS18 164 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 THAP1Q9NVV9 213 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 GPR45Q9Y5Y3 372 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 C9JVG2 144 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 HDAC3O15379 428 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 KIAA0513O60268 411 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 BCAS1O75363 584 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-223ENST00000523125 THBDP07204 575 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 EPHA3P29320 983 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 AGTR1P30556 359 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 S100A3P33764 101 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
VEGFA-223ENST00000523125 CTBP2P56545 445 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 NME5P56597 212 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 MAGOHP61326 146 aaKnown RBP11.04□□□□□ -0.64
VEGFA-223ENST00000523125 ADAM8P78325 824 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 KEAP1Q14145 624 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 QPRTQ15274 297 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 BEND6Q5SZJ8 279 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-223ENST00000523125 PDSS1Q5T2R2 415 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 TYW3Q6IPR3 259 aaKnown RBP11.04□□□□□ -0.64
VEGFA-223ENST00000523125 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-223ENST00000523125 C16orf62Q7Z3J2 963 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 SPATA19Q7Z5L4 167 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 FAM71CQ8NEG0 241 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 VPS37AQ8NEZ2 397 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 TOR1AIP2Q8NFQ8 470 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 MGARPQ8TDB4 240 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 SLC35A5Q9BS91 424 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 INPP5KQ9BT40 448 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 EXD2Q9NVH0 621 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF226Q9NYT6 803 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 BTNL2Q9UIR0 455 aa11.04□□□□□ -0.64
VEGFA-223ENST00000523125 ROS1P08922 2347 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 GOLGA8QA0A0J9YX86 632 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 GOLGA8OA6NCC3 632 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 GOLGA8NF8WBI6 632 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 HMGN4O00479 90 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 AGR2O95994 175 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 CSTAP01040 98 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 KITP10721 976 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 CD99P14209 185 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 KLK2P20151 261 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 PGM1P36871 562 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 CDKN2CP42773 168 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 CCR4P51679 360 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 SESN3P58005 492 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 PLAURQ03405 335 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 CBFBQ13951 182 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 GTF2IRD2BQ6EKJ0 949 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 NUFIP2Q7Z417 695 aaKnown RBP11.03□□□□□ -0.64
VEGFA-223ENST00000523125 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 GTF2IRD2Q86UP8 949 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 TMCO5AQ8N6Q1 288 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 ATP6V1C2Q8NEY4 427 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 RAB3IL1Q8TBN0 382 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 ZFP90Q8TF47 636 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 CPNE4Q96A23 557 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-223ENST00000523125 PIK3IP1Q96FE7 263 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 ZC3HAV1LQ96H79 300 aaKnown RBP11.03□□□□□ -0.64
VEGFA-223ENST00000523125 MAELQ96JY0 434 aaKnown RBP11.03□□□□□ -0.64
VEGFA-223ENST00000523125 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 OR52E6Q96RD3 313 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 QRSL1Q9H0R6 528 aaKnown RBP11.03□□□□□ -0.64
VEGFA-223ENST00000523125 C12orf49Q9H741 205 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 TIGARQ9NQ88 270 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 POLE3Q9NRF9 147 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 MARCOQ9UEW3 520 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms