RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CHD5Q8TDI0 1954 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TRBV2A0A0J9YWF9 115 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 A0A1W2PNV4 684 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TBC1D3BA6NDS4 549 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 BLOC1S5-TXNDC5H3BN57 136 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CDC14BO60729 498 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 MRPS14O60783 128 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SAP30O75446 220 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 FGGP02679 453 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 HTR1AP08908 422 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 C1SP09871 688 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SMIM10L1P0DMW3 83 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 MYF5P13349 255 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ARSBP15848 533 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 C4BPBP20851 252 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CALCRP30988 508 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 PTGER4P35408 488 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 GDNFP39905 211 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 PMELP40967 661 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 OPRD1P41143 372 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 RAB5CP51148 216 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 PRSS12P56730 875 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 KCNK10P57789 538 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CSNK2A1P68400 391 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 IL13RA1P78552 427 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 IFITM3Q01628 133 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 OGDHQ02218 1023 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SPEM2Q0P670 501 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 MAD2L1Q13257 205 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 UBAP2LQ14157 1087 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF460Q14592 562 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TAF1AQ15573 450 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 EXOC3L2Q2M3D2 409 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 PDLIM3Q53GG5 364 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TRIQKQ629K1 86 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TBC1D3GQ6DHY5 549 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 DOK6Q6PKX4 331 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 PAQR9Q6ZVX9 377 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CYS1Q717R9 158 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 FAM220AQ7Z4H9 259 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 WDFY1Q8IWB7 410 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ARHGAP12Q8IWW6 846 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ZC3H3Q8IXZ2 948 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ZFP82Q8N141 532 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 BATF2Q8N1L9 274 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 RNF152Q8N8N0 203 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF557Q8N988 423 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CSNK2A3Q8NEV1 391 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 OR9K2Q8NGE7 335 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ZFP90Q8TF47 636 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 C11orf40Q8WZ69 217 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SMPDL3BQ92485 455 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SLCO2A1Q92959 643 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SLC38A4Q969I6 547 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 FAF2Q96CS3 445 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 FBXO17Q96EF6 278 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 DAZAP1Q96EP5 407 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 NEIL1Q96FI4 390 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 DCUN1D1Q96GG9 259 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SMIM10Q96HG1 83 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM176AQ96HP8 235 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 RPL10LQ96L21 214 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CNN2Q99439 309 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 HINT2Q9BX68 163 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 HDHD5Q9BXW7 423 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 DUSP16Q9BY84 665 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 GSX2Q9BZM3 304 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ULBP1Q9BZM6 244 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SLCO5A1Q9H2Y9 848 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM185BQ9H7F4 350 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 RNF122Q9H9V4 155 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 SPHK2Q9NRA0 654 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CISHQ9NSE2 258 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 C1orf109Q9NX04 203 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 RHCGQ9UBD6 479 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 UPB1Q9UBR1 384 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 KCNG2Q9UJ96 466 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TBC1D24Q9ULP9 559 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 CNTN6Q9UQ52 1028 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 EXOGQ9Y2C4 368 aaKnown RBP7.01□□□□□ -1.29
HDAC3-216ENST00000523088 HIF3AQ9Y2N7 669 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 COQ4Q9Y3A0 265 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 ACTL7BQ9Y614 415 aa7.01□□□□□ -1.29
HDAC3-216ENST00000523088 TNRC6BQ9UPQ9 1833 aaKnown RBP7□□□□□ -1.29
HDAC3-216ENST00000523088 A0A1B0GW55 424 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 NKX6-3A6NJ46 265 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 SAC3D1A6NKF1 404 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 OR2AG2A6NM03 316 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 GJE1A6NN92 205 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 H7C417 338 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 K7EQS6 105 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 HRKO00198 91 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 CLIC1O00299 241 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 GFRA2O00451 464 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 MRASO14807 208 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 TPST1O60507 370 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF217O75362 1048 aa7□□□□□ -1.29
HDAC3-216ENST00000523088 LEFTY1O75610 366 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms