RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 HRO43593 1189 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 DYRK3O43781 588 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TMCC2O75069 709 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RCBTB2O95199 551 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 HLA-DPB1P04440 258 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 MRPL3P09001 348 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 BMP8BP34820 402 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 DAB2P98082 770 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF362Q5T0B9 420 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 AGAP6Q5VW22 663 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NCCRP1Q6ZVX7 275 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 BMP8AQ7Z5Y6 402 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GATAD2AQ86YP4 633 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FAM160A2Q8N612 972 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 C19orf47Q8N9M1 422 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CYB561A3Q8NBI2 242 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PEX11GQ96HA9 241 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 AGAP4Q96P64 663 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ATF6BQ99941 703 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF559Q9BR84 538 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RNF32Q9H0A6 362 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 OR51V1Q9H2C8 321 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FN3KQ9H479 309 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TMEM27Q9HBJ8 222 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 DNAJB12Q9NXW2 375 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 HPGDSO60760 199 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PPP1R3DO95685 299 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ATXN8OSP0DMR3 200 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ACAA2P42765 397 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RPS7P62081 194 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NNATQ16517 81 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PYDC2Q56P42 97 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ARMC6Q6NXE6 501 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF613Q6PF04 617 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 MCATQ8IVS2 390 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 OR10H4Q8NGA5 316 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RLN3Q8WXF3 142 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 AP3S1Q92572 193 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SPACA7Q96KW9 195 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 LRRC61Q9BV99 259 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GPR27Q9NS67 375 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SPEGQ15772 3267 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PRR23D1E9PI22 279 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 E9PI62 339 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RNF13O43567 381 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CHP2O43745 196 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PTP4A3O75365 173 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PRR23D2P0DMB1 279 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 APEX1P27695 318 aaKnown RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CCR5P51681 352 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SLC16A1P53985 500 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CTBP2P56545 445 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CRMP1Q14194 572 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NPSR1Q6W5P4 371 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NR2C2APQ86WQ0 139 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 UBQLNLQ8IYU4 475 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CHAC2Q8WUX2 184 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SENP5Q96HI0 755 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TNFRSF13CQ96RJ3 184 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 C11orf54Q9H0W9 315 aaPredicted RBP9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 MMP28Q9H239 520 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 POLE3Q9NRF9 147 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ASB6Q9NWX5 421 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TMEM5Q9Y2B1 443 aa9.93□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FAM86C2PA6NEL3 165 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GTPBP1O00178 669 aaKnown RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GNB5O14775 395 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FOXS1O43638 330 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 COQ9O75208 318 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GYPBP06028 91 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 IFI6P09912 130 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NR4A2P43354 598 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 HTR3AP46098 478 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 BTG2P78543 158 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SCN1BQ07699 218 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FHL1Q13642 323 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PRTGQ2VWP7 1150 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NDUFAF6Q330K2 333 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CNIH2Q6PI25 160 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF517Q6ZMY9 492 aaPredicted RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 UBE2J2Q8N2K1 259 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RIT1Q92963 219 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ABHD8Q96I13 439 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TEAD3Q99594 435 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ORAI3Q9BRQ5 295 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 LMF2Q9BU23 707 aaKnown RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 C14orf105Q9NVL8 296 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 BABAM2Q9NXR7 383 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RBMX2Q9Y388 322 aaKnown RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 DAPL1A0PJW8 107 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TFECO14948 347 aaPredicted RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CCNKO75909 580 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ASAH1Q13510 395 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 P2RY14Q15391 338 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 UTS2BQ765I0 119 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 METTL27Q8N6F8 245 aaPredicted RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GDPD1Q8N9F7 314 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NECTIN4Q96NY8 510 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms