RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRAPPC13A5PLN9 417 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ARRDC5A6NEK1 342 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CPSF4LA6NMK7 179 aaKnown RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 TNFRSF11BO00300 401 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 OIP5O43482 229 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 HCRTR2O43614 444 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 PEX1O43933 1283 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CYP7B1O75881 506 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 GADD45GO95257 159 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CCL3P10147 92 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF23P17027 643 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 VHLP40337 213 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 YAP1P46937 504 aaKnown RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 PTDSS1P48651 473 aaKnown RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 UCNP55089 124 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CDH12P55289 794 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 TUBA3CQ13748 450 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CBFBQ13951 182 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 GANABQ14697 944 aaKnown RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 DEFB109BQ30KR1 87 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 NDUFAF6Q330K2 333 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF468Q5VIY5 522 aaPredicted RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 SLC22A10Q63ZE4 541 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 TUBA3EQ6PEY2 450 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CBLN3Q6UW01 205 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 CCDC81Q6ZN84 652 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 TSPYL5Q86VY4 417 aaPredicted RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ZDHHC13Q8IUH4 622 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 PACRGLQ8N7B6 248 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 OR4C15Q8NGM1 316 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 OR5W2Q8NH69 310 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 B4GALNT2Q8NHY0 566 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ADAMTS16Q8TE57 1224 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 NRG4Q8WWG1 115 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 EME1Q96AY2 570 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 PSD2Q9BQI7 771 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 UTP23Q9BRU9 249 aaKnown RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 FNDC11Q9BVV2 318 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 OSBPL10Q9BXB5 764 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 VCXQ9H320 206 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF552Q9H707 407 aaPredicted RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 NMNAT1Q9HAN9 279 aaPredicted RBP11.92□□□□□ -0.5
CPNE3-205ENST00000522240 TMEM27Q9HBJ8 222 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 SACM1LQ9NTJ5 587 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ACER3Q9NUN7 267 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 STMN3Q9NZ72 180 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 PPP4R1LQ9P1A2 415 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 ICAM5Q9UMF0 924 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 KCNMB2Q9Y691 235 aa11.92□□□□□ -0.5
CPNE3-205ENST00000522240 NINQ8N4C6 2090 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 A0A0B4J2E0 115 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 A0A1B0GX12 115 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 ANKUB1A6NFN9 424 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 SAC3D1A6NKF1 404 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 CHP2O43745 196 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 ADAM11O75078 769 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 SNX4O95219 450 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 P04436 131 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 LINGO3P0C6S8 592 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 PGCP20142 388 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 ELAVL4P26378 380 aaKnown RBP11.91□□□□□ -0.5
CPNE3-205ENST00000522240 CCR4P51679 360 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 COPZ1P61923 177 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 HOXC5Q00444 222 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 TLE3Q04726 772 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 PIN1Q13526 163 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-205ENST00000522240 TRAM2Q15035 370 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 OR1Q1Q15612 314 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 FGD3Q5JSP0 725 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 BICRALQ6AI39 1079 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 IGFL2Q6UWQ7 119 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 DEPDC4Q8N2C3 294 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 LINC00471Q8N535 108 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 PSD4Q8NDX1 1056 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 SLC41A3Q96GZ6 507 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 SH3YL1Q96HL8 342 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-205ENST00000522240 TMEM41AQ96HV5 264 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 CIB1Q99828 191 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 FUZQ9BT04 418 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 C12orf10Q9HB07 376 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 GALNT9Q9HCQ5 603 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 TIMMDC1Q9NPL8 285 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 MAN2C1Q9NTJ4 1040 aa11.91□□□□□ -0.5
CPNE3-205ENST00000522240 KALRNO60229 2985 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 A0A1B0GWA3 101 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 OR5H15A6NDH6 313 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 G3V2T6 193 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 K7ENP7 123 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 NEURL1O76050 574 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 LYPD3O95274 346 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 RASAL1O95294 804 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 HPRP00739 348 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 IST1P53990 364 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 DLX5P56178 289 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 OC90Q02509 493 aaPredicted RBP11.9□□□□□ -0.5
CPNE3-205ENST00000522240 EXOC3L2Q2M3D2 409 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 COL28A1Q2UY09 1125 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 PRAMEF20Q5VT98 475 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms